RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 TRAF3IP3Q9Y228 551 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 GTF3C3Q9Y5Q9 886 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MYH11P35749 1972 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 KMT2EQ8IZD2 1858 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MUC6Q6W4X9 2439 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF318Q5VUA4 2279 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 FAM237AA0A1B0GTK4 181 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF840PA6NDX5 716 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SHISA7A6NL88 538 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 F8VP50 259 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 KLRC4O43908 158 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 LRP3O75074 770 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SMC2O95347 1197 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 PRAMEF12O95522 483 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 NR3C1P04150 777 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 RETP07949 1114 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CASP1P29466 404 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 GTF2H1P32780 548 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SOX9P48436 509 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 GALK1P51570 392 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 NDUFA8P51970 172 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SLC7A9P82251 487 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 LMNB2Q03252 620 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 TNK2Q07912 1038 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 GOLGA8FQ08AF8 430 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 GOLGA8DPQ0D2H9 430 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 PKP1Q13835 747 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CCINQ13939 588 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 NFIL3Q16649 462 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 KRBA2Q6ZNG9 492 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CEP68Q76N32 757 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SV2AQ7L0J3 742 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 ADGRG2Q8IZP9 1017 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CRYBG2Q8N1P7 616 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 GUF1Q8N442 669 aaKnown RBP6.93□□□□□ -1.3
FOXN3-205ENST00000553904 TTC16Q8NEE8 873 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SH3RF2Q8TEC5 729 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CD101Q93033 1021 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 FBXO32Q969P5 355 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 OTUB2Q96DC9 234 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SMARCD1Q96GM5 515 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 TTLL2Q9BWV7 592 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 NACA2Q9H009 215 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SMG9Q9H0W8 520 aaKnown RBP6.93□□□□□ -1.3
FOXN3-205ENST00000553904 XYLT2Q9H1B5 865 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 KCTD10Q9H3F6 313 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CYP3A43Q9HB55 503 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 DMAP1Q9NPF5 467 aaPredicted RBP6.93□□□□□ -1.3
FOXN3-205ENST00000553904 CRTAC1Q9NQ79 661 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 GCNT4Q9P109 453 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 SMG5Q9UPR3 1016 aaKnown RBP6.93□□□□□ -1.3
FOXN3-205ENST00000553904 HPSEQ9Y251 543 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 PTPRJQ12913 1337 aa6.93□□□□□ -1.3
FOXN3-205ENST00000553904 LRRIQ3A6PVS8 624 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 CHURC1-FNTBB4DL54 471 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 CETN3O15182 167 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 ZBTB24O43167 697 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 NR2F2P24468 414 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 GJA4P35212 333 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 PPP1R2P41236 205 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 PIK3CAP42336 1068 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 CASP4P49662 377 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 CDH8P55286 799 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 SLC8A3P57103 927 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 SATB1Q01826 763 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TAF10Q12962 218 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 EDRF1Q3B7T1 1238 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 ZACNQ401N2 412 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 WDR44Q5JSH3 913 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 HECTD3Q5T447 861 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 BTBD8Q5XKL5 378 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TRIM68Q6AZZ1 485 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TXNDC11Q6PKC3 985 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 PRR23BQ6ZRT6 265 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 DGLUCYQ7Z3D6 616 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TADA2BQ86TJ2 420 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 C11orf74Q86VG3 221 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 WDR5BQ86VZ2 330 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 FAM186BQ8IYM0 893 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 GRAMD1CQ8IYS0 662 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 KIAA0895Q8NCT3 520 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 ACDQ96AP0 544 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 LOXL4Q96JB6 756 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 GSDMAQ96QA5 445 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TSG101Q99816 390 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 NT5C1AQ9BXI3 368 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 B3GNT5Q9BYG0 378 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 FAM124BQ9H5Z6 455 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TLR8Q9NR97 1041 aaKnown RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 RBM12Q9NTZ6 932 aaKnown RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 CHORDC1Q9UHD1 332 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-205ENST00000553904 USP18Q9UMW8 372 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 CCL26Q9Y258 94 aa6.92□□□□□ -1.3
FOXN3-205ENST00000553904 TRIP11Q15643 1979 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 E2F8A0AVK6 867 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 C2orf78A6NCI8 922 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms