RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ARP10275 920 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 IDEP14735 1019 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 RENBPP51606 427 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 PRKAG1P54619 331 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 PLP2Q04941 152 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 FOXO1Q12778 655 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.11□□□□□ -1.43
SYNE2-210ENST00000553455 ARL6IP4Q66PJ3 421 aaKnown RBP6.11□□□□□ -1.43
SYNE2-210ENST00000553455 MRNIPQ6NTE8 343 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 KRT73Q86Y46 540 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 PALM2Q8IXS6 379 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 CHST13Q8NET6 341 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 EXTL1Q92935 676 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 FAM227BQ96M60 508 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 GOLGA2P5Q9HBQ8 144 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 GBA2Q9HCG7 927 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-210ENST00000553455 ZBTB26Q9HCK0 441 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 SMPD4Q9NXE4 827 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 VPS51Q9UID3 782 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 SERTAD3Q9UJW9 196 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 SCAF8Q9UPN6 1271 aaKnown RBP6.11□□□□□ -1.43
SYNE2-210ENST00000553455 TESMINQ9Y4I5 508 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 NOX1Q9Y5S8 564 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 ADM5C9JUS6 153 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 ASNA1O43681 348 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 CDKL5O76039 1030 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 HLA-DOAP06340 250 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 DDX6P26196 483 aaKnown RBP eCLIP6.1□□□□□ -1.43
SYNE2-210ENST00000553455 ADORA2AP29274 412 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 SLC5A2P31639 672 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 BMPR1AP36894 532 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 SP2Q02086 613 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 SCAPQ12770 1279 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 E2F2Q14209 437 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 FAXCQ5TGI0 409 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 SFRP4Q6FHJ7 346 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-210ENST00000553455 SLC15A3Q8IY34 581 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 CPXCR1Q8N123 301 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 ZNF276Q8N554 614 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 STT3BQ8TCJ2 826 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 TMEM171Q8WVE6 324 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 TRAPPC12Q8WVT3 735 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 SCLT1Q96NL6 688 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 AMBRA1Q9C0C7 1298 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 INTS13Q9NVM9 706 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 DTNAQ9Y4J8 743 aa6.1□□□□□ -1.43
SYNE2-210ENST00000553455 OR2W5A6NFC9 320 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 TMEM200CA6NKL6 621 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 AGPSO00116 658 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 PCDH17O14917 1159 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 RGS10O43665 173 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 TRIAP1O43715 76 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SPDEFO95238 335 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 HGFP14210 728 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 PPP3CBP16298 524 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 NPPBP16860 134 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 HNRNPMP52272 730 aaKnown RBP eCLIP6.09□□□□□ -1.43
SYNE2-210ENST00000553455 POSTNQ15063 836 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SPDYE7PQ495Y7 208 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 USP39Q53GS9 565 aaKnown RBP6.09□□□□□ -1.43
SYNE2-210ENST00000553455 HSP90AB4PQ58FF6 505 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SPDYAQ5MJ70 313 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 ICE2Q659A1 982 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 ARMC6Q6NXE6 501 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 JMJD6Q6NYC1 403 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-210ENST00000553455 C1orf210Q8IVY1 113 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SPARTQ8N0X7 666 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 TBC1D20Q96BZ9 403 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 FAM136AQ96C01 138 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 EID2BQ96D98 161 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 MYEOVQ96EZ4 313 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SORBS1Q9BX66 1292 aaKnown RBP6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SLC25A32Q9H2D1 315 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SAGE1Q9NXZ1 904 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 SNX14Q9Y5W7 946 aa6.09□□□□□ -1.43
SYNE2-210ENST00000553455 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 UNC119BA6NIH7 251 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 LPXNO60711 386 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 PAX3P23760 479 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 PPM1FP49593 454 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-210ENST00000553455 PDE6CP51160 858 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 BCAT1P54687 386 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 NSUN2Q08J23 767 aaKnown RBP eCLIP6.08□□□□□ -1.44
SYNE2-210ENST00000553455 FHL3Q13643 280 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 CERCAMQ5T4B2 595 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 ABLIM2Q6H8Q1 611 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 TANGO2Q6ICL3 276 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 MZT2AQ6P582 158 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 SMAP1Q8IYB5 467 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-210ENST00000553455 COLGALT2Q8IYK4 626 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 OR1N1Q8NGS0 311 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 SLC30A5Q8TAD4 765 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 ATG4AQ8WYN0 398 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 DVL3Q92997 716 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-210ENST00000553455 LTV1Q96GA3 475 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-210ENST00000553455 PRPF18Q99633 342 aaKnown RBP6.08□□□□□ -1.44
SYNE2-210ENST00000553455 PARPBPQ9NWS1 579 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms