RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 TRIM49CP0CI26 452 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 TARSP26639 723 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 ASPAP45381 313 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 AMPD2Q01433 879 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 PPP3CAQ08209 521 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 ZNF528Q3MIS6 628 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 GPIHBP1Q8IV16 184 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 ZNF687Q8N1G0 1237 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 STKLD1Q8NE28 680 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 TAS1R2Q8TE23 839 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 SMARCD1Q96GM5 515 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 SLITRK1Q96PX8 696 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 B3GNT5Q9BYG0 378 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 FAM86C1Q9NVL1 165 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 COMMD8Q9NX08 183 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 RIF1Q5UIP0 2472 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-205ENST00000553300 SHISA7A6NL88 538 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 LAMTOR5O43504 91 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 TADA3O75528 432 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 CKMP06732 381 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 TCF3P15923 654 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 HDCP19113 662 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 RAP1GAPP47736 663 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 MXI1P50539 228 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 INCA1Q0VD86 236 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 PDGFRLQ15198 375 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 ITPRIPL2Q3MIP1 535 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 ANKRD40Q6AI12 368 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 FOXR2Q6PJQ5 311 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 ZC3H14Q6PJT7 736 aaKnown RBP13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 ZC3H3Q8IXZ2 948 aaKnown RBP13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 NUP93Q8N1F7 819 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 KIAA1958Q8N8K9 716 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 PDZD8Q8NEN9 1154 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 OVCA2Q8WZ82 227 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 FAM83CQ9BQN1 747 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 MED10Q9BTT4 135 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 ZNF518BQ9C0D4 1074 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 NIF3L1Q9GZT8 377 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 METTL14Q9HCE5 456 aaKnown RBP13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 TRPC7Q9HCX4 862 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 DMAP1Q9NPF5 467 aaPredicted RBP13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 GKN1Q9NS71 199 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 SPATA6Q9NWH7 488 aaPredicted RBP13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 CHMP5Q9NZZ3 219 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 COL4A2P08572 1712 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 ANAPC1Q9H1A4 1944 aa13.97□□□□□ -0.17
HNRNPC-205ENST00000553300 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 LRRN2O75325 713 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 CCNE1P24864 410 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 YWHAQP27348 245 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 CTHP32929 405 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 NDST1P52848 882 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 FZD5Q13467 585 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 LRRC32Q14392 662 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 PPP2R5DQ14738 602 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 WDR44Q5JSH3 913 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 DGKKQ5KSL6 1271 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 SPOPLQ6IQ16 392 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 ACOT1Q86TX2 421 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 FAM35AQ86V20 835 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 NKD2Q969F2 451 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 EXOC4Q96A65 974 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 CYP2S1Q96SQ9 504 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 PHOX2BQ99453 314 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 NT5C1AQ9BXI3 368 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 SMG9Q9H0W8 520 aaKnown RBP13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 MMRN2Q9H8L6 949 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 LMAN1LQ9HAT1 526 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 RAB20Q9NX57 234 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 GTSE1Q9NYZ3 720 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 GCNT4Q9P109 453 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 ARMCX3Q9UH62 379 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 NDRG2Q9UN36 371 aaKnown RBP13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 ARHGAP26Q9UNA1 814 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 CCL26Q9Y258 94 aa13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-205ENST00000553300 ZNF840PA6NDX5 716 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 CLDN5O00501 218 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 SP9P0CG40 484 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 USP46P62068 366 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 UBE2HP62256 183 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 TAF10Q12962 218 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 RUNX3Q13761 415 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 PAQR9Q6ZVX9 377 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 FUKQ8N0W3 1084 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 SYNPOQ8N3V7 929 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 EEF2KMTQ96G04 330 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 CEP63Q96MT8 703 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 CHRDQ9H2X0 955 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 IL37Q9NZH6 218 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms