RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TRIM13O60858 407 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CILPO75339 1184 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CER1O95813 267 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 RPLP2P05387 115 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SPATA31D3P0C874 917 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SMIM10L2AP0DMW4 78 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SMIM10L2BP0DMW5 78 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 FGFR1P11362 822 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MYCLP12524 364 aaPredicted RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 GNSP15586 552 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PNLIPP16233 465 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PI3P19957 117 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 FGFR2P21802 821 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MAPK1P28482 360 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 HOXC8P31273 242 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 GRK6P43250 576 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 NOP2P46087 812 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SOX9P48436 509 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SERPINB4P48594 390 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 ALDH5A1P51649 535 aaPredicted RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 ART1P52961 327 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CRYBB1P53674 252 aaPredicted RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 AK2P54819 239 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MLLT10P55197 1068 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 NTHL1P78549 312 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 ICA1Q05084 483 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 ARHGAP1Q07960 439 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MGAT3Q09327 533 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 GRSF1Q12849 480 aaKnown RBP eCLIP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PAK2Q13177 524 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PON2Q15165 354 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 KRT24Q2M2I5 525 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM198Q66K66 360 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TTBK2Q6IQ55 1244 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TAF2Q6P1X5 1199 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PKN3Q6P5Z2 889 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 GALNT18Q6P9A2 607 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CCDC62Q6P9F0 684 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 IL27RAQ6UWB1 636 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SPATA31D4Q6ZUB0 917 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 USP51Q70EK9 711 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 Q71RC1 249 aaPredicted RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MCATQ8IVS2 390 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 YAF2Q8IY57 180 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 LINC01356Q8N9X3 169 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TSTD1Q8NFU3 115 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PPTC7Q8NI37 304 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CPT1CQ8TCG5 803 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 GRIN3AQ8TCU5 1115 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 DEPDC1BQ8WUY9 529 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 HVCN1Q96D96 273 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MCRS1Q96EZ8 462 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 IGSF21Q96ID5 467 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 VCPIP1Q96JH7 1222 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 C5orf34Q96MH7 638 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CASD1Q96PB1 797 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM209Q96SK2 561 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 POLR3GLQ9BT43 218 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CHMP4AQ9BY43 222 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TPSD1Q9BZJ3 242 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 XYLT2Q9H1B5 865 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 C12orf49Q9H741 205 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 ELAC1Q9H777 363 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 FBRSQ9HAH7 460 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 RGS18Q9NS28 235 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 RNF146Q9NTX7 359 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SETD4Q9NVD3 440 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SUSD2Q9UGT4 822 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TUBD1Q9UJT1 453 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CLCA2Q9UQC9 943 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MRPS23Q9Y3D9 190 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 TAF6LQ9Y6J9 622 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 BIRC6Q9NR09 4857 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 CUBNO60494 3623 aa2.53□□□□□ -2.01
TRAV1-1-201ENST00000542354 RYR3Q15413 4870 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 COL1A2P08123 1366 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 MYOCOSA0A1B0GUC4 107 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC38A8A6NNN8 435 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 C9IYK1 514 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 M0QZ92 97 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 TEX28O15482 410 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NRDCO43847 1150 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RFPL3O75679 317 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ALDH1A2O94788 518 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ARIH2O95376 493 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 SSBP05455 408 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NR1D1P20393 614 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RBMS1P29558 406 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 SHMT1P34896 483 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 MATKP42679 507 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 LSSP48449 732 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 KCNC1P48547 511 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CDR1P51861 262 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CLDN6P56747 220 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ASIC1P78348 528 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM189BP81408 668 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPL6Q02878 288 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF33AQ06730 810 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RAD51AP2Q09MP3 1159 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 EFEMP1Q12805 493 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms