RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 TRIOO75962 3097 aa22.66■■□□□ 1.22
UBE2D3-229ENST00000510129 DENND4CQ5VZ89 1909 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 BIN1O00499 593 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 PMM2O15305 246 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 BMP6P22004 513 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 YWHAEP62258 255 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 TXNDC8Q6A555 127 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 TPRG1Q6ZUI0 275 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 FAM35AQ86V20 835 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 NUP93Q8N1F7 819 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 PDZD8Q8NEN9 1154 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 PRSS33Q8NF86 280 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 OVCA2Q8WZ82 227 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 SLC35C1Q96A29 364 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 GBP4Q96PP9 640 aa22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 APOBEC3GQ9HC16 384 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-229ENST00000510129 CC2D1AQ6P1N0 951 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-229ENST00000510129 DTWD2Q8NBA8 298 aa22.64■■□□□ 1.21
UBE2D3-229ENST00000510129 C8orf33Q9H7E9 229 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-229ENST00000510129 HEBP1Q9NRV9 189 aa22.64■■□□□ 1.21
UBE2D3-229ENST00000510129 CTNND2Q9UQB3 1225 aa22.64■■□□□ 1.21
UBE2D3-229ENST00000510129 ZDBF2Q9HCK1 2354 aa22.64■■□□□ 1.21
UBE2D3-229ENST00000510129 NCANO14594 1321 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 OBSL1O75147 1896 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 P4HA2O15460 535 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 PI15O43692 258 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 CILPO75339 1184 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 PRAMEF12O95522 483 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 YWHAQP27348 245 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 CAMK4Q16566 473 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 FUKQ8N0W3 1084 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 STKLD1Q8NE28 680 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 RSPRY1Q96DX4 576 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 HNRNPABQ99729 332 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 DUSP9Q99956 384 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 TRPC7Q9HCX4 862 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 LTB4R2Q9NPC1 389 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 KRT82Q9NSB4 513 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 PIAS3Q9Y6X2 628 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 GREB1Q4ZG55 1949 aa22.63■■□□□ 1.21
UBE2D3-229ENST00000510129 ARNTLO00327 626 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 CLDN5O00501 218 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 TADA3O75528 432 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 AP1G2O75843 785 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 CKMP06732 381 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 FAM200BP0CF97 657 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 NHLH1Q02575 133 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 UBXN2BQ14CS0 331 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 CBWD6Q4V339 395 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 CBWD3Q5JTY5 395 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 CBWD5Q5RIA9 395 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 KIAA1958Q8N8K9 716 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 MLKLQ8NB16 471 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 SLC2A14Q8TDB8 520 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 SEMA4DQ92854 862 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 USP13Q92995 863 aaPredicted RBP22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 FBXO44Q9H4M3 255 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 CSNK1G1Q9HCP0 422 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 RWDD2AQ9UIY3 292 aa22.62■■□□□ 1.21
UBE2D3-229ENST00000510129 FAM170BA6NMN3 283 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 GOLGA6L22H0YM25 854 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 CCDC192P0DO97 292 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 TCF3P15923 654 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 HDCP19113 662 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 CD58P19256 250 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 TBXAS1P24557 533 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 FMO5P49326 533 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 KPNA1P52294 538 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 MARSP56192 900 aaKnown RBP22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 AMPD2Q01433 879 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 TCF15Q12870 199 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 RALGPS2Q86X27 583 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 FAM3CQ92520 227 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 ELMO3Q96BJ8 720 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 CYFIP2Q96F07 1278 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 IER2Q9BTL4 223 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 FOXQ1Q9C009 403 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 CLSTN2Q9H4D0 955 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 PNPLA8Q9NP80 782 aa22.61■■□□□ 1.21
UBE2D3-229ENST00000510129 ZNF840PA6NDX5 716 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 RPS9P46781 194 aaKnown RBP22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 USP46P62068 366 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 TAF10Q12962 218 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 PDGFRLQ15198 375 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 PAQR9Q6ZVX9 377 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 EXOC4Q96A65 974 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 KCNK16Q96T55 309 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.6■■□□□ 1.211e-7■■■■■ 61.1
UBE2D3-229ENST00000510129 CISHQ9NSE2 258 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 GCNT4Q9P109 453 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 HMGXB4Q9UGU5 601 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 DACH1Q9UI36 760 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 ARHGAP26Q9UNA1 814 aa22.6■■□□□ 1.21
UBE2D3-229ENST00000510129 CCDC130P13994 396 aa22.59■■□□□ 1.21
UBE2D3-229ENST00000510129 CACNA2D1P54289 1103 aa22.59■■□□□ 1.21
UBE2D3-229ENST00000510129 SLC8A3P57103 927 aa22.59■■□□□ 1.21
UBE2D3-229ENST00000510129 ITPRIPL2Q3MIP1 535 aa22.59■■□□□ 1.21
UBE2D3-229ENST00000510129 ATOH1Q92858 354 aaPredicted RBP22.59■■□□□ 1.21
UBE2D3-229ENST00000510129 FBXO32Q969P5 355 aa22.59■■□□□ 1.21
UBE2D3-229ENST00000510129 CLDN23Q96B33 292 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms