RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
PRDM2-214ENST00000505823 TCERG1LQ5VWI1 586 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
PRDM2-214ENST00000505823 DDX42Q86XP3 938 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRDM2-214ENST00000505823 NUP93Q8N1F7 819 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 FBXL13Q8NEE6 735 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 ENGASEQ8NFI3 743 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 OVCA2Q8WZ82 227 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
PRDM2-214ENST00000505823 NOTCH4Q99466 2003 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 PKMYT1Q99640 499 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 SLC46A2Q9BY10 475 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 FOXQ1Q9C009 403 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 FBXO44Q9H4M3 255 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 DMAP1Q9NPF5 467 aaPredicted RBP12.75□□□□□ -0.37
PRDM2-214ENST00000505823 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 ARMCX3Q9UH62 379 aaPredicted RBP12.75□□□□□ -0.37
PRDM2-214ENST00000505823 PCDHA5Q9Y5H7 936 aa12.75□□□□□ -0.37
PRDM2-214ENST00000505823 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 F8VP50 259 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
PRDM2-214ENST00000505823 ABL1P00519 1130 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 YWHAQP27348 245 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 PRCPP42785 496 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 MXI1P50539 228 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 SDHAF4Q5VUM1 108 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 SCARA5Q6ZMJ2 495 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 SYNPOQ8N3V7 929 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 CPA6Q8N4T0 437 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 KIAA1958Q8N8K9 716 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 NT5C1AQ9BXI3 368 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 FAM126AQ9BYI3 521 aaPredicted RBP12.74□□□□□ -0.37
PRDM2-214ENST00000505823 NIF3L1Q9GZT8 377 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 NACA2Q9H009 215 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
PRDM2-214ENST00000505823 TSC2P49815 1807 aa12.74□□□□□ -0.37
PRDM2-214ENST00000505823 GNA14O95837 355 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 NBL1P41271 181 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 IFNAR2P48551 515 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 GPR15P49685 360 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 DLG4P78352 724 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 ZNF528Q3MIS6 628 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 DCAF17Q5H9S7 520 aaPredicted RBP12.73□□□□□ -0.37
PRDM2-214ENST00000505823 STXBP5Q5T5C0 1151 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 CRYBG2Q8N1P7 616 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 CLDN23Q96B33 292 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 CEP63Q96MT8 703 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
PRDM2-214ENST00000505823 PROB1E7EW31 1015 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 GFRA3O60609 400 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 ATG13O75143 517 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 AP1G2O75843 785 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 VNN1O95497 513 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 FAM200BP0CF97 657 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 CD72P21854 359 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 CCNE1P24864 410 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 CCR3P51677 355 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 NDST1P52848 882 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 CDH8P55286 799 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 UBE2HP62256 183 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 GOLGA8FQ08AF8 430 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 GOLGA8DPQ0D2H9 430 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 GRSF1Q12849 480 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRDM2-214ENST00000505823 RUNX3Q13761 415 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 FRMD5Q7Z6J6 570 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 ACOT1Q86TX2 421 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 SMYD4Q8IYR2 804 aaPredicted RBP12.72□□□□□ -0.37
PRDM2-214ENST00000505823 ADSSL1Q8N142 457 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 TTC16Q8NEE8 873 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 SPATA20Q8TB22 786 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 USP13Q92995 863 aaPredicted RBP12.72□□□□□ -0.37
PRDM2-214ENST00000505823 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
PRDM2-214ENST00000505823 ATP2A3Q93084 1043 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 LMAN1LQ9HAT1 526 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 GKN1Q9NS71 199 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 DUS2Q9NX74 493 aaKnown RBP12.72□□□□□ -0.37
PRDM2-214ENST00000505823 KMT2EQ8IZD2 1858 aa12.72□□□□□ -0.37
PRDM2-214ENST00000505823 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
PRDM2-214ENST00000505823 HCRTO43612 131 aa12.71□□□□□ -0.37
PRDM2-214ENST00000505823 NFATC1O95644 943 aa12.71□□□□□ -0.37
PRDM2-214ENST00000505823 TBXAS1P24557 533 aaPredicted RBP12.71□□□□□ -0.37
PRDM2-214ENST00000505823 IFRD2Q12894 506 aaPredicted RBP12.71□□□□□ -0.37
PRDM2-214ENST00000505823 MTF1Q14872 753 aa12.71□□□□□ -0.37
PRDM2-214ENST00000505823 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms