RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 COL9A1P20849 921 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 BDNFP23560 247 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 GRIK1P39086 918 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ACADSBP45954 432 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 CLCN4P51793 760 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 FMO1Q01740 532 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 DUSP6Q16828 381 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 PKDCCQ504Y2 493 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 C10orf76Q5T2E6 689 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 TAF3Q5VWG9 929 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 PAQR9Q6ZVX9 377 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ZNF571Q7Z3V5 609 aaPredicted RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ATAD1Q8NBU5 361 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 KREMEN2Q8NCW0 462 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 SPATA17Q96L03 361 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 HSFY1Q96LI6 401 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ZSWIM1Q9BR11 485 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNX17-208ENST00000493711 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 CYP4F11Q9HBI6 524 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ACP6Q9NPH0 428 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 DZANK1Q9NVP4 752 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 FBXW11Q9UKB1 542 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 TGM5O43548 720 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 CYP1A1P04798 512 aaPredicted RBP13.13□□□□□ -0.31
SNX17-208ENST00000493711 MMEP08473 750 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 POU2F2P09086 479 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNX17-208ENST00000493711 CHRNB2P17787 502 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 HOXA9P31269 272 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 GPD2P43304 727 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 NSFP46459 744 aaKnown RBP13.13□□□□□ -0.31
SNX17-208ENST00000493711 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 DUSP4Q13115 394 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 GRIN2CQ14957 1233 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 VEPH1Q14D04 833 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 MGAT5BQ3V5L5 792 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 ELMOD1Q8N336 334 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 SLC35F5Q8WV83 523 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 KCTD13Q8WZ19 329 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 CASP10Q92851 521 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 PGLYRP2Q96PD5 576 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 LPIN3Q9BQK8 851 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 PRDM12Q9H4Q4 367 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 ADAMTS1Q9UHI8 967 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 SCN1AP35498 2009 aa13.13□□□□□ -0.31
SNX17-208ENST00000493711 CLDN5O00501 218 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 FBXO21O94952 628 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 CYP2F1P24903 491 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 NRIP1P48552 1158 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 EPHB3P54753 998 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 MAP3K7CLP57077 242 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 CENPCQ03188 943 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 PDE4CQ08493 712 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 SPA17Q15506 151 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 ACAD10Q6JQN1 1059 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 DENND1BQ6P3S1 775 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 CLEC20AQ6ZU45 233 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 ITIH5Q86UX2 942 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 TTC30AQ86WT1 665 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 ERICH1Q86X53 443 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 ZDHHC17Q8IUH5 632 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 MAFAQ8NHW3 353 aaPredicted RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 SLC30A5Q8TAD4 765 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 UBA3Q8TBC4 463 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 VCPIP1Q96JH7 1222 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 CDX2Q99626 313 aaPredicted RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
SNX17-208ENST00000493711 SMOQ99835 787 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 FBXO44Q9H4M3 255 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 ZDHHC7Q9NXF8 308 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 STRIP2Q9ULQ0 834 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 INSL5Q9Y5Q6 135 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms