RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CHKAP35790 457 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 ALDH9A1P49189 494 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 PDE6CP51160 858 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 COPAP53621 1224 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 SP2Q02086 613 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 PUM3Q15397 648 aaKnown RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 ZRSR2Q15696 482 aaKnown RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 NPY5RQ15761 445 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 ZNF750Q32MQ0 723 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 CCDC38Q502W7 563 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 FAM83BQ5T0W9 1011 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 CERCAMQ5T4B2 595 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 FAXCQ5TGI0 409 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 FCRL6Q6DN72 434 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 ARHGEF19Q8IW93 802 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 SLC44A3Q8N4M1 653 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 VGLL2Q8N8G2 317 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 MYCBPAPQ8TBZ2 947 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 IPO4Q8TEX9 1081 aaKnown RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 ATG4AQ8WYN0 398 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 CCT6BQ92526 530 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 CAVIN3Q969G5 261 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 TRIM63Q969Q1 353 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 C18orf8Q96DM3 657 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 ZNF503Q96F45 646 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 ZBTB45Q96K62 511 aaPredicted RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 Q96MF0 132 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 MLST8Q9BVC4 326 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 PCDHAC1Q9H158 963 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 DHX36Q9H2U1 1008 aaKnown RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 MMRN2Q9H8L6 949 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 CYP4F11Q9HBI6 524 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 GLOD4Q9HC38 313 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 LRFN1Q9P244 771 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 DNMT3BQ9UBC3 853 aaKnown RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 SSX2IPQ9Y2D8 614 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 PIP5K1BO14986 540 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 YY2O15391 372 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 CCNT2O60583 730 aaKnown RBP4.68□□□□□ -1.66
CLK1-213ENST00000492793 PLA2G6O60733 806 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 SNX2O60749 519 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 SKAP2O75563 359 aaPredicted RBP4.68□□□□□ -1.66
CLK1-213ENST00000492793 RHOP08100 348 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 ADRB1P08588 477 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 HGFP14210 728 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 INSRRP14616 1297 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 MAKP20794 623 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 PGDP52209 483 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 HNRNPMP52272 730 aaKnown RBP eCLIP4.68□□□□□ -1.661e-7■■■■□ 21.9
CLK1-213ENST00000492793 ITIH3Q06033 890 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 CCNIQ14094 377 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 TBCCQ15814 346 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 MZT2AQ6P582 158 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 USP49Q70CQ1 688 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 KRT28Q7Z3Y7 464 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 SMC5Q8IY18 1101 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 ATG16L2Q8NAA4 619 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 GLIS1Q8NBF1 620 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 XAGE5Q8WWM1 108 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 FKBP10Q96AY3 582 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 LENG9Q96B70 501 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 GRAMD1AQ96CP6 724 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 AIFM2Q9BRQ8 373 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 DPCDQ9BVM2 203 aaPredicted RBP4.68□□□□□ -1.66
CLK1-213ENST00000492793 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 STK33Q9BYT3 514 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 SLC25A32Q9H2D1 315 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 FAM83DQ9H4H8 585 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 SERHL2Q9H4I8 314 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 RGL1Q9NZL6 768 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 DKK4Q9UBT3 224 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 ZMYND8Q9ULU4 1186 aaPredicted RBP4.68□□□□□ -1.66
CLK1-213ENST00000492793 USP22Q9UPT9 525 aa4.68□□□□□ -1.66
CLK1-213ENST00000492793 hCG_1642624A0A1W2PR95 340 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 PIPSLA2A3N6 862 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 NPIPB8E9PQR5 432 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 PSMD9O00233 223 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 CD3EAPO15446 510 aaKnown RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 VNN1O95497 513 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 LMNAP02545 664 aaKnown RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 CSF1RP07333 972 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 SRGAP2BP0DMP2 458 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 SRGNP10124 158 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 NTSR1P30989 418 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 CLCN2P51788 898 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 PDE1AP54750 535 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 NXPH1P58417 271 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 GPS1Q13098 491 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 BLMHQ13867 455 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 DHX8Q14562 1220 aaKnown RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 RAB30Q15771 203 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 LY6KQ17RY6 165 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 ARHGAP15Q53QZ3 475 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 MIIPQ5JXC2 388 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 ABHD17BQ5VST6 288 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 MRGPREQ86SM8 312 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 CCDC28AQ8IWP9 274 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms