RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	LRPAP1	P30533	357 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	CCT4	P50991	539 aa	Known RBP	4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	PDE6C	P51160	858 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	PLCD1	P51178	756 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	RHBDL3	P58872	404 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	KRT17	Q04695	432 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	MYO1E	Q12965	1108 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	LCE1A	Q5T7P2	110 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	PXDC1	Q5TGL8	231 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	FCRL6	Q6DN72	434 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	SERPINA13P	Q6UXR4	307 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	ZNF280B	Q86YH2	543 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	GALNT16	Q8N428	558 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	OSCP1	Q8WVF1	389 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	HPS3	Q969F9	1004 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	RITA1	Q96K30	269 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	PRSS22	Q9GZN4	317 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	SPRTN	Q9H040	489 aa	Predicted RBP	4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	VPS16	Q9H269	839 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	AASDHPPT	Q9NRN7	309 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	ELOVL5	Q9NYP7	299 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	STAP2	Q9UGK3	403 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	ANKRD6	Q9Y2G4	727 aa		4.11	□□□□□ -1.75
VPS36-205	ENST00000492650	FER1L4	A9Z1Z3	1794 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	POC1B-GALNT4	F8VUJ3	575 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	OFD1	O75665	1012 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TOP3B	O95985	862 aa	Known RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TH	P07101	528 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	CYP2C9	P11712	490 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	XRCC6	P12956	609 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	SFPQ	P23246	707 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	SLC11A2	P49281	568 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	BIRC2	Q13490	618 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	FGL2	Q14314	439 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	RABEP1	Q15276	862 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	ODR4	Q5SWX8	454 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	CAND1	Q86VP6	1230 aa	Known RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	GALNT4	Q8N4A0	578 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TERB1	Q8NA31	727 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	C8orf58	Q8NAV2	365 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	PRSS3P2	Q8NHM4	247 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	EVI5L	Q96CN4	794 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	C1GALT1C1	Q96EU7	318 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	C8orf48	Q96LL4	319 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	LENG8	Q96PV6	779 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	RPS6KC1	Q96S38	1066 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	NUP88	Q99567	741 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	PCGF6	Q9BYE7	350 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	CXorf36	Q9H7Y0	433 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TRMT13	Q9NUP7	481 aa	Known RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	PIH1D1	Q9NWS0	290 aa	Known RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TUBA8	Q9NY65	449 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TERF2IP	Q9NYB0	399 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	TFCP2L1	Q9NZI6	479 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	WDR17	Q8IZU2	1322 aa		4.1	□□□□□ -1.75
VPS36-205	ENST00000492650	CYP2D7	A0A087X1C5	515 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	UBE2Q2L	H0YL09	131 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650		H7C1Q1	480 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	AP4M1	O00189	453 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	ADAMTS3	O15072	1205 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	ERC2	O15083	957 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	PRKCB	P05771	671 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	ALDH5A1	P51649	535 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	NEK2	P51955	445 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	PRKAG1	P54619	331 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	TRIP6	Q15654	476 aa	Known RBP	4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	LY6K	Q17RY6	165 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	MGAT5B	Q3V5L5	792 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	C4orf46	Q504U0	113 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	ATAT1	Q5SQI0	421 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	IFIT1B	Q5T764	474 aa	Known RBP	4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	MTHFD1L	Q6UB35	978 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	KIRREL2	Q6UWL6	708 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	SLC15A4	Q8N697	577 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	DNAJC5G	Q8N7S2	189 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	PLBD2	Q8NHP8	589 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	SOCS4	Q8WXH5	440 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	P2RX7	Q99572	595 aa	Known RBP	4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	CIPC	Q9C0C6	399 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	KLHL13	Q9P2N7	655 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	MED16	Q9Y2X0	877 aa		4.09	□□□□□ -1.75
VPS36-205	ENST00000492650	AP1G1	O43747	822 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	TJP3	O95049	919 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	VNN1	O95497	513 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	CSF1R	P07333	972 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	CYP2A6	P11509	494 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	IL1R2	P27930	398 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	RENBP	P51606	427 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	DGKE	P52429	567 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	RAB1A	P62820	205 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	ZNF267	Q14586	743 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	DAZAP2	Q15038	168 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	ZIK1	Q3SY52	487 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	IZUMO1	Q8IYV9	350 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	ABRA	Q8N0Z2	381 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	MPP5	Q8N3R9	675 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	HOOK2	Q96ED9	719 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	HMCES	Q96FZ2	354 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	MRGPRX1	Q96LB2	322 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms