RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MYRFLQ96LU7 910 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 NECTIN4Q96NY8 510 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 APOL5Q9BWW9 433 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 LRRC3Q9BY71 257 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 NUCKS1Q9H1E3 243 aaKnown RBP20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 PRDM6Q9NQX0 595 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 COMMD8Q9NX08 183 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 EHD2Q9NZN4 543 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 PCDHGC3Q9UN70 934 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 BRWD1Q9NSI6 2320 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 GREB1Q4ZG55 1949 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 GRXCR2A6NFK2 248 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 SLC38A8A6NNN8 435 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 TNFRSF10BO14763 440 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 XPO1O14980 1071 aaKnown RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 MICAL2O94851 1124 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 FERP16591 822 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 HMGA1P17096 107 aaKnown RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 BST2Q10589 180 aaKnown RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 TRIM14Q14142 442 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 CLUL1Q15846 466 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 AAK1Q2M2I8 961 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 SDHAF4Q5VUM1 108 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 GRASPQ7Z6J2 395 aaPredicted RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 NUP93Q8N1F7 819 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 TRMT2BQ96GJ1 504 aaKnown RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 WDR6Q9NNW5 1121 aaKnown RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 IL37Q9NZH6 218 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 AIPL1Q9NZN9 384 aa20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 USP15Q9Y4E8 981 aaPredicted RBP20.49■□□□□ 0.87
PCOLCE-208ENST00000487172 LRRC53A6NM62 1247 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 HHLA1C9JL84 531 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 RTN3O95197 1032 aaPredicted RBP20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 GYPCP04921 128 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 PDE6CP51160 858 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 ZBED6P86452 979 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 PDE4CQ08493 712 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 TAF12Q16514 161 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 IRF2BP2Q7Z5L9 587 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 TMC8Q8IU68 726 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 ZNF397Q8NF99 534 aaPredicted RBP20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 UBA3Q8TBC4 463 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 GPR152Q8TDT2 470 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 EPS8L1Q8TE68 723 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 SLC35F5Q8WV83 523 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 DDX1Q92499 740 aaKnown RBP20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 CORO1BQ9BR76 489 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 TTLL2Q9BWV7 592 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 LHX5Q9H2C1 402 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 ASAH2Q9NR71 780 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 HCFC1R1Q9NWW0 138 aa20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 UXTQ9UBK9 157 aaPredicted RBP20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 LUC7L2Q9Y383 392 aaKnown RBP20.48■□□□□ 0.87
PCOLCE-208ENST00000487172 FGF19O95750 216 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 RHOP08100 348 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 GPD2P43304 727 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 PLA2G4AP47712 749 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 TFF2Q03403 129 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 MTMR3Q13615 1198 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 CBX2Q14781 532 aaPredicted RBP20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 SMAD2Q15796 467 aaKnown RBP20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 PABPC1LQ4VXU2 614 aaKnown RBP20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 CYP4A22Q5TCH4 519 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 NOP9Q86U38 636 aaKnown RBP20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 PIGZQ86VD9 579 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 ATXN2LQ8WWM7 1075 aaKnown RBP20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 KCTD13Q8WZ19 329 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 SYN2Q92777 582 aaPredicted RBP20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 FAM50BQ9Y247 325 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 PATJQ8NI35 1801 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 NOTCH4Q99466 2003 aa20.47■□□□□ 0.87
PCOLCE-208ENST00000487172 FAM92AA1XBS5 289 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 M0QYV0 167 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 ZNF197O14709 1029 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 CASP14P31944 242 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 KRT9P35527 623 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 RAB41Q5JT25 222 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 PRSS36Q5K4E3 855 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 SFMBT2Q5VUG0 894 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 PTCRAQ6ISU1 281 aaPredicted RBP20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 PDZD4Q76G19 769 aaPredicted RBP20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 HS6ST3Q8IZP7 471 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 STK32AQ8WU08 396 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 SECISBP2LQ93073 1101 aaKnown RBP20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 HSFY1Q96LI6 401 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 IL21Q9HBE4 155 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 ZNF334Q9HCZ1 680 aaPredicted RBP20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 CDH22Q9UJ99 828 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 NOCTQ9UK39 431 aaKnown RBP20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 CLUHO75153 1309 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 DOCK6Q96HP0 2047 aa20.46■□□□□ 0.87
PCOLCE-208ENST00000487172 CFHP08603 1231 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 CDH5P33151 784 aaPredicted RBP20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 PRKCIP41743 596 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 RPL34P49207 117 aaKnown RBP20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 KIF11P52732 1056 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 SLC5A3P53794 718 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 USP46P62068 366 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 CDR2Q01850 454 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 TBX2Q13207 712 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms