RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 LRRC46Q96FV0 321 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 APOPT1Q96IL0 206 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CLPTM1LQ96KA5 538 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TRIM47Q96LD4 638 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RUNDC3BQ96NL0 473 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TRAPPC9Q96Q05 1148 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 HS3ST6Q96QI5 342 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TUBGCP5Q96RT8 1024 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 THUMPD3Q9BV44 507 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 JAM3Q9BX67 310 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ITPAQ9BY32 194 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF518BQ9C0D4 1074 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 VPS33BQ9H267 617 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CDIP1Q9H305 208 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 POFUT1Q9H488 388 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MLXIPQ9HAP2 919 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PDE7BQ9NP56 450 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PRDM8Q9NQV8 689 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RBM12Q9NTZ6 932 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TDP1Q9NUW8 608 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 USP40Q9NVE5 1235 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TAB2Q9NYJ8 693 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PLA2G3Q9NZ20 509 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF212Q9UDV6 495 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PCSK1NQ9UHG2 260 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ANAPC5Q9UJX4 755 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 FBXL5Q9UKA1 691 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 DSEQ9UL01 958 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TMPRSS11EQ9UL52 423 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHA6Q9UN73 950 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SCAF8Q9UPN6 1271 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MTO1Q9Y2Z2 717 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 DERAQ9Y315 318 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHA13Q9Y5I0 950 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CDY2AQ9Y6F7 541 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 EPN1Q9Y6I3 576 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SPAG9O60271 1321 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MYO3AQ8NEV4 1616 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 VWFP04275 2813 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RELNP78509 3460 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 GVINP1Q7Z2Y8 2422 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 UGGT2Q9NYU1 1516 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TCRBV5S4A2TA0A5A2 114 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KRT87PA6NCN2 255 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SAC3D1A6NKF1 404 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 C2orf81A6NN90 581 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 POTEB2H3BUK9 544 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 J3QL48 77 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 GPR25O00155 361 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MEIS1O00470 390 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ELL2O00472 640 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 BTN3A1O00481 513 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KCNK3O14649 394 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 FOXP2O15409 715 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CAPN5O15484 640 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZBTB43O43298 467 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ASNA1O43681 348 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PRPSAP2O60256 369 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 NRP2O60462 931 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 NPHS1O60500 1241 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 STAM2O75886 525 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TPPPO94811 219 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 APOL3O95236 402 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 METTL18O95568 372 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 APBB3O95704 486 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 NDST3O95803 873 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 OPN1MWP04001 364 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 OPN1MW2P0DN77 364 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 OPN1MW3P0DN78 364 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 UBL4AP11441 157 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 JUPP14923 745 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 IFNGR1P15260 489 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 VAV1P15498 845 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KCNA5P22460 613 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 GABRB3P28472 473 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 HOXA10P31260 410 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 AKT1P31749 480 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 GP5P40197 560 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ARL1P40616 181 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 BCL6P41182 706 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 DPP6P42658 865 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TXKP42681 527 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CARSP49589 748 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CCT4P50991 539 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TKTL1P51854 596 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 RCAN1P53805 252 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SEC24CP53992 1094 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PRKAA2P54646 552 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 BCAT1P54687 386 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 RPP30P78346 268 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MXRA7P84157 204 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF200P98182 395 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CDC42EP1Q00587 391 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SCAPQ12770 1279 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 AIMP2Q13155 320 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CBX3Q13185 183 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SLC14A1Q13336 389 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TUSC3Q13454 348 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SNW1Q13573 536 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms