RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 PTPN5P54829 565 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 FCHO2Q0JRZ9 810 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 UBXN2BQ14CS0 331 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 FOXR2Q6PJQ5 311 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 FUKQ8N0W3 1084 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 PJA1Q8NG27 643 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 SLC2A14Q8TDB8 520 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 CSGALNACT1Q8TDX6 532 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 LRRC3BQ96PB8 259 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 TWNKQ96RR1 684 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 TTLL2Q9BWV7 592 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 DNAI2Q9GZS0 605 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 CLSTN2Q9H4D0 955 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 TRAV19A0A0A6YYK7 116 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 SOBPA7XYQ1 873 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 CILPO75339 1184 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 DCNP07585 359 aaKnown RBP25.5■■□□□ 1.67
CPNE1-223ENST00000475146 CD72P21854 359 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 ADORA2BP29275 332 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 GREB1Q4ZG55 1949 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 ARHGAP29Q52LW3 1261 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 MUC6Q6W4X9 2439 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 CLEC17AQ6ZS10 378 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 PAQR9Q6ZVX9 377 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 C12orf29Q8N999 325 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 USP13Q92995 863 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-223ENST00000475146 ZFYVE19Q96K21 471 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 KCNK16Q96T55 309 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 DDX23Q9BUQ8 820 aaKnown RBP25.5■■□□□ 1.67
CPNE1-223ENST00000475146 KIF9Q9HAQ2 790 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 TRPV5Q9NQA5 729 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 TDP1Q9NUW8 608 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 TRPM5Q9NZQ8 1165 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 CCL26Q9Y258 94 aa25.5■■□□□ 1.67
CPNE1-223ENST00000475146 CKMP06732 381 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 TCF15Q12870 199 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 ZNF852Q6ZMS4 543 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 CCDC105Q8IYK2 499 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 NUP93Q8N1F7 819 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 FAXDC2Q96IV6 333 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 GBP4Q96PP9 640 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 LTB4R2Q9NPC1 389 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 THG1LQ9NWX6 298 aaKnown RBP25.49■■□□□ 1.67
CPNE1-223ENST00000475146 COQ4Q9Y3A0 265 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 PIAS3Q9Y6X2 628 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 TICRRQ7Z2Z1 1910 aa25.49■■□□□ 1.67
CPNE1-223ENST00000475146 C2orf78A6NCI8 922 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 FMO5P49326 533 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 TAF10Q12962 218 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 ZNF394Q53GI3 561 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 DTWD2Q8NBA8 298 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 TTC16Q8NEE8 873 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 TATDN2Q93075 761 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 SLITRK1Q96PX8 696 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 ARID3AQ99856 593 aa25.48■■□□□ 1.67
CPNE1-223ENST00000475146 SRRTQ9BXP5 876 aaKnown RBP25.48■■□□□ 1.67
CPNE1-223ENST00000475146 MRPS17Q9Y2R5 130 aaKnown RBP25.48■■□□□ 1.67
CPNE1-223ENST00000475146 ZNF638Q14966 1978 aaKnown RBP25.47■■□□□ 1.67
CPNE1-223ENST00000475146 FAM170BA6NMN3 283 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 ARNTLO00327 626 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 RTN3O95197 1032 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-223ENST00000475146 GNA14O95837 355 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 ABL1P00519 1130 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 USP17L7P0C7H9 530 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 FAM200BP0CF97 657 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 YWHAQP27348 245 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 PLCB2Q00722 1185 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 NHLH1Q02575 133 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 TTC39CQ8N584 583 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 ARL14EPQ8N8R7 260 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-223ENST00000475146 WHAMMQ8TF30 809 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 IPO9Q96P70 1041 aaKnown RBP25.47■■□□□ 1.67
CPNE1-223ENST00000475146 SLC22A12Q96S37 553 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 CYP2S1Q96SQ9 504 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 NUP62CLQ9H1M0 184 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 CISHQ9NSE2 258 aa25.47■■□□□ 1.67
CPNE1-223ENST00000475146 COL4A2P08572 1712 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 MAN2B1O00754 1011 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 FGFR1OPO95684 399 aaKnown RBP25.46■■□□□ 1.67
CPNE1-223ENST00000475146 PPP3CCP48454 512 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 PDE6CP51160 858 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 KPNA1P52294 538 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-223ENST00000475146 SLC5A3P53794 718 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 MAP3K7CLP57077 242 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 LRMPQ12912 555 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 ZNF268Q14587 947 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-223ENST00000475146 TTC8Q8TAM2 541 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 FBXO32Q969P5 355 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 CYFIP2Q96F07 1278 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 HNRNPABQ99729 332 aaKnown RBP25.46■■□□□ 1.67
CPNE1-223ENST00000475146 SMOQ99835 787 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 LMBRD1Q9NUN5 540 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 GCNT4Q9P109 453 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 RWDD2AQ9UIY3 292 aa25.46■■□□□ 1.67
CPNE1-223ENST00000475146 MTF2Q9Y483 593 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-223ENST00000475146 ZNF840PA6NDX5 716 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 H0Y858 1186 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 HDCP19113 662 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 TARSP26639 723 aaKnown RBP25.45■■□□□ 1.66
CPNE1-223ENST00000475146 CC2D1AQ6P1N0 951 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms