RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SOAT2O75908 522 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 FAM200BP0CF97 657 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 KRT5P13647 590 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 MTHFRP42898 656 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 EPHA5P54756 1037 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 POLR2FP61218 127 aaKnown RBP15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 RAPGEF1Q13905 1077 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 SGO2Q562F6 1265 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 FIGNQ5HY92 759 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 ATAT1Q5SQI0 421 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 PPP1R26Q5T8A7 1209 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 TRIM67Q6ZTA4 783 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 BMP8AQ7Z5Y6 402 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 IQCDQ96DY2 449 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 ASIC4Q96FT7 647 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 PCMTD1Q96MG8 357 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 MED10Q9BTT4 135 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 TTYH3Q9C0H2 523 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 WDR6Q9NNW5 1121 aaKnown RBP15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 TMEM30AQ9NV96 361 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
CDC42SE1-203ENST00000470278 TMEM221A6NGB7 291 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 M0R296 226 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 FOXN3O00409 490 aaPredicted RBP15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 AP1G2O75843 785 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 CD19P15391 556 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 NPR3P17342 541 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 GRIK1P39086 918 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 CACNA2D1P54289 1103 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 ZXDAP98168 799 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 DDR2Q16832 855 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 LCLAT1Q6UWP7 414 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 CLEC20AQ6ZU45 233 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 TRMT2BQ96GJ1 504 aaKnown RBP15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 PHF7Q9BWX1 381 aaPredicted RBP15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 EDEM3Q9BZQ6 932 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 KCNH6Q9H252 994 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 PIDD1Q9HB75 910 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 TSPAN16Q9UKR8 245 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 MYO6Q9UM54 1294 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 CLUHO75153 1309 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 NOTCH4Q99466 2003 aa15.82■□□□□ 0.12
CDC42SE1-203ENST00000470278 F8VP50 259 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ZNF292O60281 2723 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 CSH1P0DML2 217 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 CSH2P0DML3 217 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ANXA13P27216 316 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ADORA2BP29275 332 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 GNA15P30679 374 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 GPR15P49685 360 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 CDR1P51861 262 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 BCAT1P54687 386 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 TCF15Q12870 199 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 CNGA2Q16280 664 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 PKDCCQ504Y2 493 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 TMC8Q8IU68 726 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 FMNL3Q8IVF7 1028 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 SCN4BQ8IWT1 228 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ANKRD52Q8NB46 1076 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ZMIZ2Q8NF64 920 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 TFAP2BQ92481 460 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 MYRFLQ96LU7 910 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ZNF512Q96ME7 567 aaPredicted RBP15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 SMOQ99835 787 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ZSWIM1Q9BR11 485 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 NUP58Q9BVL2 599 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 APOL5Q9BWW9 433 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 LRRC3Q9BY71 257 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 DUSP16Q9BY84 665 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 ASAH2Q9NR71 780 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 EHD2Q9NZN4 543 aa15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 DNMT3BQ9UBC3 853 aaKnown RBP15.81■□□□□ 0.12
CDC42SE1-203ENST00000470278 GVINP1Q7Z2Y8 2422 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 MYH10P35580 1976 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 OBSL1O75147 1896 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 A0A1W2PQJ5 194 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 CYP26A1O43174 497 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 MED7O43513 233 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 MICAL2O94851 1124 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 FGF19O95750 216 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 RHOP08100 348 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 PNMA6AP0CW24 399 aaPredicted RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 SETSIPP0DME0 302 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 HMGA1P17096 107 aaKnown RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 PTPN2P17706 415 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 BRD2P25440 801 aaKnown RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 VCPP55072 806 aaKnown RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 SLC8A3P57103 927 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 BPIFB4P59827 614 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 PTK2Q05397 1052 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 GOLGA7BQ2TAP0 167 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 PABPC1LQ4VXU2 614 aaKnown RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 DENND5BQ6ZUT9 1274 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 GRASPQ7Z6J2 395 aaPredicted RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 DNAJB7Q7Z6W7 309 aaPredicted RBP15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 TTC30AQ86WT1 665 aa15.8■□□□□ 0.12
CDC42SE1-203ENST00000470278 SPAG5Q96R06 1193 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 277.7 ms