RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C8orf48Q96LL4 319 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 DPEP3Q9H4B8 488 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 MAGEF1Q9HAY2 307 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 RCOR1Q9UKL0 485 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 MYH11P35749 1972 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 GPR179Q6PRD1 2367 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 COL4A2P08572 1712 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ZNF840PA6NDX5 716 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 F8VP50 259 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 LEFTY2O00292 366 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 CLDN5O00501 218 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 GDF9O60383 454 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 PDIA4P13667 645 aaKnown RBP14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ATICP31939 592 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 DNM1Q05193 864 aaKnown RBP14.16□□□□□ -0.14
CPSF4-210ENST00000469897 NR1H3Q13133 447 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 PSMD2Q13200 908 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 CSRP2Q16527 193 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 BMT2Q1RMZ1 405 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 HSCBQ8IWL3 235 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ADGRG2Q8IZP9 1017 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 PLEKHO2Q8TD55 490 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 CD101Q93033 1021 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ATP2A3Q93084 1043 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 EXOC4Q96A65 974 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ELMO3Q96BJ8 720 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 CEP295NLQ96MC4 621 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 RTKNQ9BST9 563 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 B3GNT5Q9BYG0 378 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ZNF518BQ9C0D4 1074 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 XYLT2Q9H1B5 865 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 TMEM30AQ9NV96 361 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 CFAP45Q9UL16 551 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 ARHGAP26Q9UNA1 814 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 SPTBN4Q9H254 2564 aa14.16□□□□□ -0.14
CPSF4-210ENST00000469897 UBE4BO95155 1302 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 TRIM66O15016 1216 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 LRP3O75074 770 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 RPP40O75818 363 aaKnown RBP14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CCDC192P0DO97 292 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
CPSF4-210ENST00000469897 TAF10Q12962 218 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 STK4Q13043 487 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 USP4Q13107 963 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CCDC6Q16204 474 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 FBXO43Q4G163 708 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 TDRD10Q5VZ19 366 aaKnown RBP14.15□□□□□ -0.14
CPSF4-210ENST00000469897 ATL3Q6DD88 541 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 PRR23CQ6ZRP0 262 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 KBTBD6Q86V97 674 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 C12orf56Q8IXR9 622 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CAMKK1Q8N5S9 505 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 RPLP0P6Q8NHW5 317 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 GAB3Q8WWW8 586 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 SYAP1Q96A49 352 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-210ENST00000469897 PAGE5Q96GU1 130 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 KCNK16Q96T55 309 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 TTLL2Q9BWV7 592 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 ARRDC1-AS1Q9H2J1 176 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 SMPD4Q9NXE4 827 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 EHD2Q9NZN4 543 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CGNQ9P2M7 1197 aaKnown RBP14.15□□□□□ -0.14
CPSF4-210ENST00000469897 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-210ENST00000469897 FRYLO94915 3013 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 SCN1AP35498 2009 aa14.15□□□□□ -0.14
CPSF4-210ENST00000469897 DCHS1Q96JQ0 3298 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 MIA3Q5JRA6 1907 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 CCDC163A0A0D9SF12 145 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 ANTXRLA6NF34 631 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 LRRIQ3A6PVS8 624 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-210ENST00000469897 SCAMP3O14828 347 aaKnown RBP14.14□□□□□ -0.15
CPSF4-210ENST00000469897 KLRC4O43908 158 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 STAU1O95793 577 aaKnown RBP14.14□□□□□ -0.15
CPSF4-210ENST00000469897 C4BPAP04003 597 aaKnown RBP14.14□□□□□ -0.15
CPSF4-210ENST00000469897 SLFN14P0C7P3 912 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 PPP3CCP48454 512 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 PDE6CP51160 858 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 IFRD2Q12894 506 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-210ENST00000469897 BIRC3Q13489 604 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 KMT5BQ4FZB7 885 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 B3GALNT2Q8NCR0 500 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 HHIPQ96QV1 700 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 CPQQ9Y646 472 aa14.14□□□□□ -0.15
CPSF4-210ENST00000469897 TICRRQ7Z2Z1 1910 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 PATJQ8NI35 1801 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 ACTN4O43707 911 aaKnown RBP14.13□□□□□ -0.15
CPSF4-210ENST00000469897 CLSTN1O94985 981 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 NFATC1O95644 943 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 TCF3P15923 654 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 PFKLP17858 780 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 RAP1GAPP47736 663 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 SLC6A11P48066 632 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 SEC13P55735 322 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 DLG4P78352 724 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 SLC7A9P82251 487 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 DMC1Q14565 340 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 PAQR9Q6ZVX9 377 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms