RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	DPH6	Q7L8W6	267 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	RALGPS2	Q86X27	583 aa	Predicted RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	BPIFB1	Q8TDL5	484 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CSGALNACT1	Q8TDX6	532 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	TAS1R2	Q8TE23	839 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	TMEM174	Q8WUU8	243 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	RUBCN	Q92622	972 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	TRMT2B	Q96GJ1	504 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	MYRFL	Q96LU7	910 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CEP63	Q96MT8	703 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	GCNA	Q96QF7	691 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	MRPL45	Q9BRJ2	306 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	SRRT	Q9BXP5	876 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	EPC1	Q9H2F5	836 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	METTL14	Q9HCE5	456 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	TMEM8A	Q9HCN3	771 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	NDRG2	Q9UN36	371 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	SPECC1L-ADORA2A	F8WAN1	911 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	TADA3	O75528	432 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	CSH1	P0DML2	217 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	CSH2	P0DML3	217 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	GNL1	P36915	607 aa	Predicted RBP	13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	CDH8	P55286	799 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	NOP14	P78316	857 aa	Known RBP	13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	ZNF268	Q14587	947 aa	Predicted RBP	13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	DPCR1	Q3MIW9	517 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	WDR44	Q5JSH3	913 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	C1orf220	Q5T0J3	134 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	FAM171B	Q6P995	826 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	SASS6	Q6UVJ0	657 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	SCN4B	Q8IWT1	228 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	CMTM8	Q8IZV2	173 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	CELF5	Q8N6W0	485 aa	Known RBP	13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	MLKL	Q8NB16	471 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	KBTBD7	Q8WVZ9	684 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	DUSP9	Q99956	384 aa	Known RBP	13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	SLC46A2	Q9BY10	475 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	KIF9	Q9HAQ2	790 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	RWDD2A	Q9UIY3	292 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	GTF3C4	Q9UKN8	822 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	KIAA1549L	Q6ZVL6	1849 aa		13.54	□□□□□ -0.24
FDPS-204	ENST00000461507	SLC38A8	A6NNN8	435 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	DPYSL4	O14531	572 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CCDC192	P0DO97	292 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CD58	P19256	250 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	TRIM21	P19474	475 aa	Known RBP	13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	WARS	P23381	471 aa	Known RBP	13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	LMO2	P25791	158 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	MAGEA11	P43364	429 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	SOX9	P48436	509 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	GPR15	P49685	360 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CCR3	P51677	355 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	RPL10A	P62906	217 aa	Known RBP	13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CLDN10	P78369	228 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	FOXK2	Q01167	660 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	ORC1	Q13415	861 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	LRRC32	Q14392	662 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	GAS6	Q14393	721 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CCDC142	Q17RM4	750 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	MDH1B	Q5I0G3	518 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CCDC183	Q5T5S1	534 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	TXNDC11	Q6PKC3	985 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	C4orf50	Q6ZRC1	276 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	FILIP1	Q7Z7B0	1213 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	MON1A	Q86VX9	555 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	SPEM1	Q8N4L4	309 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	FBXL13	Q8NEE6	735 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	GIPC2	Q8TF65	315 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	MED10	Q9BTT4	135 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	XYLT2	Q9H1B5	865 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	LMAN1L	Q9HAT1	526 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	UXT	Q9UBK9	157 aa	Predicted RBP	13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	CDH9	Q9ULB4	789 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	DCHS1	Q96JQ0	3298 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	WDR87	Q6ZQQ6	2873 aa		13.53	□□□□□ -0.24
FDPS-204	ENST00000461507	ATP2C2	O75185	946 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	STAU1	O95793	577 aa	Known RBP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	GNA14	O95837	355 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	CYP2F1	P24903	491 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	GTF2H1	P32780	548 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	CETN1	Q12798	172 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	LRMP	Q12912	555 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	CCIN	Q13939	588 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	HSP90AA4P	Q58FG1	418 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	DGKK	Q5KSL6	1271 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	SDHAF4	Q5VUM1	108 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	TSSK4	Q6SA08	328 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	ATRIP	Q8WXE1	791 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	TAF4B	Q92750	862 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	USP13	Q92995	863 aa	Predicted RBP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	MYLPF	Q96A32	169 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	ZFYVE19	Q96K21	471 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	CEP295NL	Q96MC4	621 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	FAM83C	Q9BQN1	747 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	NIF3L1	Q9GZT8	377 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	DPEP3	Q9H4B8	488 aa		13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	GTSE1	Q9NYZ3	720 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms