RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 EIF3FO00303 357 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ADAM11O75078 769 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ATP9AO75110 1047 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ALDH2P05091 517 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 PGK2P07205 417 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 SPATA31C1P0DKV0 1188 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCDC192P0DO97 292 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 MTHFD2P13995 350 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 EDNRBP24530 442 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 RPA1P27694 616 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ELF1P32519 619 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ICAM3P32942 547 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCT6AP40227 531 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 STAT6P42226 847 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 AFMP43652 599 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 AGFG1P52594 562 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 SLC5A3P53794 718 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 SRSF11Q05519 484 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 SREBF2Q12772 1141 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ITGB3BPQ13352 177 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 PNOCQ13519 176 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 POSTNQ15063 836 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZRSR1Q15695 479 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 STXBP2Q15833 593 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 FSCN1Q16658 493 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 UGT8Q16880 541 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 FAM110CQ1W6H9 321 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 DEFB115Q30KQ5 88 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMEM119Q4V9L6 283 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCDC157Q569K6 752 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 NT5DC1Q5TFE4 455 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CYP4F22Q6NT55 531 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 LETMD1Q6P1Q0 360 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 SASS6Q6UVJ0 657 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 C17orf99Q6UX52 265 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 EP400NLQ6ZTU2 488 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CHSY3Q70JA7 882 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 DYMQ7RTS9 669 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CDH24Q86UP0 819 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 NLRX1Q86UT6 975 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCDC103Q8IW40 242 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 ABRAQ8N0Z2 381 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 PRR18Q8N4B5 295 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 SPATA20Q8TB22 786 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 EDARADDQ8WWZ3 215 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CALML4Q96GE6 196 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCDC34Q96HJ3 373 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMEM41AQ96HV5 264 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CGRRF1Q99675 332 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 KCNJ15Q99712 375 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 MIPEPQ99797 713 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 HSD17B14Q9BPX1 270 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 POLR3CQ9BUI4 534 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMPRSS13Q9BYE2 586 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 BTBD1Q9H0C5 482 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TRIT1Q9H3H1 467 aaKnown RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CUEDC2Q9H467 287 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TSPY26PQ9H489 355 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 IFT80Q9P2H3 777 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 CPA4Q9UI42 421 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TUBE1Q9UJT0 475 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 TUBD1Q9UJT1 453 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 EDARQ9UNE0 448 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 PCDHA5Q9Y5H7 936 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 A0A087WWV3 80 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 BICDL2A1A5D9 508 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 SLC15A5A6NIM6 579 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 FOXN3O00409 490 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 BIN1O00499 593 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 IRAK2O43187 625 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 CA12O43570 354 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 TLR2O60603 784 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMCC2O75069 709 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 COBLO75128 1261 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MED24O75448 989 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 SKAP2O75563 359 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 SLITRK3O94933 977 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 SMC2O95347 1197 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 GSNP06396 782 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ADH5P11766 374 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 KCNA2P16389 499 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ADORA2AP29274 412 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAPK4P31152 587 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 RAC1P63000 192 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 APBA1Q02410 837 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 NOGQ13253 232 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 GRM1Q13255 1194 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 GRB14Q14449 540 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 EPHA7Q15375 998 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZNF792Q3KQV3 632 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ITPRIPL1Q6GPH6 555 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 NCAPH2Q6IBW4 605 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 C8orf86Q6ZUL3 223 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 RFX8Q6ZV50 586 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAEAQ7L5Y9 396 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms