RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 ATP5DP30049 168 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 CCDC38Q502W7 563 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 NLRP7Q8WX94 980 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 STAU1O95793 577 aaKnown RBP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 HMGCRP04035 888 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZSCAN5DPP0CG00 497 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 ARSEP51690 589 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 CNGA2Q16280 664 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 TAZQ16635 292 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC35B2Q8TB61 432 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 ARHGEF2Q92974 986 aaKnown RBP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 METTL5Q9NRN9 209 aaKnown RBP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 VDRP11473 427 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 GPD2P43304 727 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 INCA1Q0VD86 236 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 HADHQ16836 314 aaKnown RBP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 MCRS1Q96EZ8 462 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 SYT17Q9BSW7 474 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 SYNCQ9H7C4 482 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 UNCXA6NJT0 531 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 XRCC4Q13426 336 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 LAMB3Q13751 1172 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 MARCH8Q5T0T0 291 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 TSC22D3Q99576 134 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 OSBPL1AQ9BXW6 950 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZWILCHQ9H900 591 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 MORF4L1Q9UBU8 362 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 LGALS13Q9UHV8 139 aa17.04■□□□□ 0.32
PIKFYVE-206ENST00000443896 BTBD19C9JJ37 291 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 M0QYV0 167 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 ABHD2P08910 425 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 CETPP11597 493 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 ETS1P14921 441 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 ABL2P42684 1182 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 MAGEA4P43358 317 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 SMTNL2Q2TAL5 461 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 TRIM74Q86UV6 250 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 TRIM73Q86UV7 250 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 NT5DC4Q86YG4 428 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 EMC1Q8N766 993 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 ACAP3Q96P50 834 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 PAPOLBQ9NRJ5 636 aaKnown RBP17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 CTNNAL1Q9UBT7 734 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 IFNAR2P48551 515 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 RBP5P82980 135 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 GPS1Q13098 491 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 GRIK4Q16099 956 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 MAP1SQ66K74 1059 aaPredicted RBP17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 CCT6BQ92526 530 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 C9orf72Q96LT7 481 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 FRMD8P1Q9BZ68 369 aaPredicted RBP17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 TMEM165Q9HC07 324 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 PCDH9Q9HC56 1237 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
PIKFYVE-206ENST00000443896 KDELR1P24390 212 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 TUBP50607 506 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 STAT4Q14765 748 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 MORF4L2Q15014 288 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 ACAP1Q15027 740 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 HEXIM2Q96MH2 286 aaKnown RBP17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 PRMT1Q99873 361 aaKnown RBP17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 TMEM121Q9BTD3 319 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 PAPOLAP51003 745 aaKnown RBP17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 CCDC142Q17RM4 750 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 KCNT1Q5JUK3 1230 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 BBS12Q6ZW61 710 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 ELAC2Q9BQ52 826 aaKnown RBP17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 TRIM33Q9UPN9 1127 aa17.02■□□□□ 0.32
PIKFYVE-206ENST00000443896 NDC80O14777 642 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 SMPD1P17405 629 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 GRM5P41594 1212 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 NDST1P52848 882 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 DUSP28Q4G0W2 176 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 RNASEH2BQ5TBB1 312 aaKnown RBP17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 VSTM1Q6UX27 236 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 TTC39CQ8N584 583 aa17.02■□□□□ 0.31
PIKFYVE-206ENST00000443896 DPPA5A6NC42 116 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 CDH16O75309 829 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 MMP3P08254 477 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 POLE2P56282 527 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 TTC13Q8NBP0 860 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 CMASQ8NFW8 434 aaPredicted RBP17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 CCDC77Q9BR77 488 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 EBF2Q9HAK2 575 aa17.01■□□□□ 0.31
PIKFYVE-206ENST00000443896 EURLQ9NYK6 297 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms