RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SYT3Q9BQG1 590 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 PHF7Q9BWX1 381 aaPredicted RBP5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 IL21RQ9HBE5 538 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 PRDM7Q9NQW5 492 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 FAM30AQ9NZY2 134 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 ACAD8Q9UKU7 415 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 SMG5Q9UPR3 1016 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 HPSEQ9Y251 543 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 FRMD4BQ9Y2L6 1034 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 ZNF711Q9Y462 761 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 PSAT1Q9Y617 370 aa5.86□□□□□ -1.47
TM9SF3-202ENST00000443638 hCG_1807616A0A1W2PRN6 198 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TSPY2A6NKD2 308 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CXorf49A8MYA2 514 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 E9PLN8 166 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 J3KTA2 159 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 M0QYG6 137 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 GTPBP1O00178 669 aaKnown RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 KIAA0391O15091 583 aaKnown RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 KLK10O43240 276 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TAF5LO75529 589 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 MED26O95402 600 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 VIPP01282 170 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TSPY3P0CV98 308 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TSPY8P0CW00 308 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 RAP2AP10114 183 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 RAC2P15153 192 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 ATP5JP18859 108 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 ITGB7P26010 798 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 EPHA8P29322 1005 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 SERPINA4P29622 427 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 ACSL1P33121 698 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CTNNA1P35221 906 aaKnown RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 RGS2P41220 211 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 ETV4P43268 484 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 ITGA1P56199 1179 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TSPY1Q01534 308 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CREB5Q02930 508 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 WTAPQ15007 396 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 GPR68Q15743 365 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TBCEQ15813 527 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 TBC1D10BQ4KMP7 808 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 AMOTQ4VCS5 1084 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CCDC92Q53HC0 331 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 PLBD1Q6P4A8 553 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 LRRC8DQ7L1W4 858 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 VSIG1Q86XK7 387 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CHCHD4Q8N4Q1 142 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 NLGN4YQ8NFZ3 816 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 KCNG4Q8TDN1 519 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CPT1BQ92523 772 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 KTI12Q96EK9 354 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 LIN37Q96GY3 246 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 APOPT1Q96IL0 206 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 GPR20Q99678 358 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 VKORC1Q9BQB6 163 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 MRI1Q9BV20 369 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 HESX1Q9UBX0 185 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 CDY1Q9Y6F8 540 aa5.85□□□□□ -1.47
TM9SF3-202ENST00000443638 ZMYM3Q14202 1370 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 IRS2Q9Y4H2 1338 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 SAC3D1A6NKF1 404 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 SRGAP2BP0DMP2 458 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 AKT1P31749 480 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ZEB1P37275 1124 aaPredicted RBP5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 MAGEA10P43363 369 aaPredicted RBP5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 NLRP5P59047 1200 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ADAM8P78325 824 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ADAM15Q13444 863 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 MAMLD1Q13495 774 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 SEC23BQ15437 767 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 TBCCQ15814 346 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 DUSP28Q4G0W2 176 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 SLC23A3Q6PIS1 610 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ZNF574Q6ZN55 896 aaPredicted RBP5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 PRPF39Q86UA1 669 aaKnown RBP5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 TMIEQ8NEW7 156 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 MYLIPQ8WY64 445 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 USP6NLQ92738 828 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ADPGKQ9BRR6 497 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 MXD3Q9BW11 206 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 RNF32Q9H0A6 362 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 SLC25A32Q9H2D1 315 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 SPON1Q9HCB6 807 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ATP8A2Q9NTI2 1148 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 MRPS18AQ9NVS2 196 aaKnown RBP5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 ZDHHC7Q9NXF8 308 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 TMOD4Q9NZQ9 345 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 VPS51Q9UID3 782 aa5.84□□□□□ -1.47
TM9SF3-202ENST00000443638 PNPLA7Q6ZV29 1317 aa5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 KDM3AQ9Y4C1 1321 aa5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 AP3D1O14617 1153 aa5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 NRP1O14786 923 aa5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 DCLK1O15075 740 aa5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 ERAL1O75616 437 aaKnown RBP5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 RPP40O75818 363 aaKnown RBP5.83□□□□□ -1.48
TM9SF3-202ENST00000443638 MTA2O94776 668 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms