RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 CREB5Q02930 508 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 IFRD2Q12894 506 aaPredicted RBP18.28■□□□□ 0.52
FAM20B-202ENST00000440702 ELF2Q15723 593 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 ST3GAL2Q16842 350 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 SYT13Q7L8C5 426 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 LIMS2Q7Z4I7 341 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 TTC30AQ86WT1 665 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 DDX1Q92499 740 aaKnown RBP18.28■□□□□ 0.52
FAM20B-202ENST00000440702 DHX58Q96C10 678 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 PCED1BQ96HM7 432 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 SPATA17Q96L03 361 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 MRPL45Q9BRJ2 306 aaKnown RBP18.28■□□□□ 0.52
FAM20B-202ENST00000440702 TPSD1Q9BZJ3 242 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 DUSP15Q9H1R2 295 aaPredicted RBP18.28■□□□□ 0.52
FAM20B-202ENST00000440702 SNX25Q9H3E2 840 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 SMPD4Q9NXE4 827 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 TRPM5Q9NZQ8 1165 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 ARHGAP26Q9UNA1 814 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 LAMA1P25391 3075 aa18.28■□□□□ 0.52
FAM20B-202ENST00000440702 F8VP50 259 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 LEFTY2O00292 366 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 CLIC2O15247 247 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 NFATC1O95644 943 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 LIMK1P53667 647 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 ZXDBP98169 803 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 SURF1Q15526 300 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 MAPRE1Q15691 268 aaKnown RBP18.27■□□□□ 0.52
FAM20B-202ENST00000440702 C2orf27AQ580R0 203 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 PLA2G2CQ5R387 149 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 VSTM1Q6UX27 236 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 DENND5BQ6ZUT9 1274 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 DPH6Q7L8W6 267 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 TRAPPC11Q7Z392 1133 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 WDR49Q8IV35 697 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 NELFCDQ8IXH7 590 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 TSTD1Q8NFU3 115 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 OR6B3Q8NGW1 331 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 ZC3H10Q96K80 434 aaKnown RBP18.27■□□□□ 0.52
FAM20B-202ENST00000440702 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 NME7Q9Y5B8 376 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 PCDHGA5Q9Y5G8 931 aa18.27■□□□□ 0.52
FAM20B-202ENST00000440702 TRIM66O15016 1216 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 CLSTN1O94985 981 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 TNNI1P19237 187 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 OPRD1P41143 372 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 NASPP49321 788 aaPredicted RBP18.26■□□□□ 0.51
FAM20B-202ENST00000440702 PDE6CP51160 858 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
FAM20B-202ENST00000440702 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
FAM20B-202ENST00000440702 RNF43Q68DV7 783 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 FILIP1Q7Z7B0 1213 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 CCDC33Q8N5R6 958 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 CCDC127Q96BQ5 260 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 TRIM9Q9C026 710 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 DPEP3Q9H4B8 488 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 VPS45Q9NRW7 570 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 TFIP11Q9UBB9 837 aaKnown RBP18.26■□□□□ 0.51
FAM20B-202ENST00000440702 CPQQ9Y646 472 aa18.26■□□□□ 0.51
FAM20B-202ENST00000440702 MYH10P35580 1976 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.25■□□□□ 0.51
FAM20B-202ENST00000440702 CLDN5O00501 218 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 SPTLC2O15270 562 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 STX6O43752 255 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 RHOBTB1O94844 696 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 CYP17A1P05093 508 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 TCF3P15923 654 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 GNL1P36915 607 aaPredicted RBP18.25■□□□□ 0.51
FAM20B-202ENST00000440702 CACNA2D1P54289 1103 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 TNNC1P63316 161 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 E2F4Q16254 413 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 FAM26FQ5R3K3 315 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 FOXD4L5Q5VV16 416 aaPredicted RBP18.25■□□□□ 0.51
FAM20B-202ENST00000440702 ANO7Q6IWH7 933 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 SFTPA1Q8IWL2 248 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 LINC00301Q8NCQ3 95 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 MYCBPAPQ8TBZ2 947 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 USP33Q8TEY7 942 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 FOXD4L4Q8WXT5 416 aaPredicted RBP18.25■□□□□ 0.51
FAM20B-202ENST00000440702 FNBP1Q96RU3 617 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 EDEM2Q9BV94 578 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 ZNF518BQ9C0D4 1074 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 LRRC27Q9C0I9 530 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 RNF38Q9H0F5 515 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 AGPAT3Q9NRZ7 376 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
FAM20B-202ENST00000440702 USP24Q9UPU5 2620 aa18.25■□□□□ 0.51
FAM20B-202ENST00000440702 MYO18AQ92614 2054 aaKnown RBP18.24■□□□□ 0.51
FAM20B-202ENST00000440702 ZNF840PA6NDX5 716 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 K7EQS6 105 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 EIF3DO15371 548 aaKnown RBP eCLIP18.24■□□□□ 0.51
FAM20B-202ENST00000440702 CST3P01034 146 aaPredicted RBP18.24■□□□□ 0.51
FAM20B-202ENST00000440702 CASP1P29466 404 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 CYP24A1Q07973 514 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 GAB4Q2WGN9 574 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 TTLL2Q9BWV7 592 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 ZSCAN16Q9H4T2 348 aaPredicted RBP18.24■□□□□ 0.51
FAM20B-202ENST00000440702 KIAA1586Q9HCI6 787 aa18.24■□□□□ 0.51
FAM20B-202ENST00000440702 TMEM30AQ9NV96 361 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms