RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 CBWD3Q5JTY5 395 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 CBWD5Q5RIA9 395 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 IZUMO3Q5VZ72 239 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 ZDHHC17Q8IUH5 632 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 CD99L2Q8TCZ2 262 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 ALKBH8Q96BT7 664 aaKnown RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 NUDCD1Q96RS6 583 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 MOSPD1Q9UJG1 213 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 LAMB1P07942 1786 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 MMEP08473 750 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 HADHBP55084 474 aaKnown RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 RNF219Q5W0B1 726 aaPredicted RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 TATDN2Q93075 761 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.11□□□□□ -0.63
NOD1-206ENST00000434755 CDY2AQ9Y6F7 541 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 CCDC160A6NGH7 325 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 DFFAO00273 331 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 CYP1A2P05177 515 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 ARSEP51690 589 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 KPNA2P52292 529 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 BCAT1P54687 386 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 IFT88Q13099 833 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 CCNG2Q16589 344 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 CCDC33Q8N5R6 958 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 TRIM51Q9BSJ1 452 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 PACSIN1Q9BY11 444 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 FAM96AQ9H5X1 160 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 RRN3Q9NYV6 651 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 REXO2Q9Y3B8 237 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 CDH16O75309 829 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 CIB2O75838 187 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 POMCP01189 267 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 APRTP07741 180 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 SERPINB6P35237 376 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 HSPA9P38646 679 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 DRG2P55039 364 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 EIF3EP60228 445 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 DRP2Q13474 957 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 IKBKEQ14164 716 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 RCN2Q14257 317 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 ZNF268Q14587 947 aaPredicted RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 ZACNQ401N2 412 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 HGSNATQ68CP4 663 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 ZNF280DQ6N043 979 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
NOD1-206ENST00000434755 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
NOD1-206ENST00000434755 TMEM199Q8N511 208 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 MREGQ8N565 214 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 STKLD1Q8NE28 680 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 ATXN7L3BQ96GX2 97 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 GDF3Q9NR23 364 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 PDGFCQ9NRA1 345 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 BARX2Q9UMQ3 279 aaPredicted RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 MAP2K7O14733 419 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 OPLAHO14841 1288 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 ALDH2P05091 517 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 DARSP14868 501 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 PPP3CAQ08209 521 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 PDIA2Q13087 525 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 PDK2Q15119 407 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 ZBED8Q8IZ13 594 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 LRRC52Q8N7C0 313 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 DEPDC1BQ8WUY9 529 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 TJP2Q9UDY2 1190 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 KRT38O76015 456 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 SMPD1P17405 629 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 TPD52P55327 224 aaPredicted RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 CREMQ03060 361 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 SPARCL1Q14515 664 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 UGCGQ16739 394 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 KCNT1Q5JUK3 1230 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 NOP9Q86U38 636 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 PABPC5Q96DU9 382 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 FAM84AQ96KN4 292 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 C9orf72Q96LT7 481 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 TACO1Q9BSH4 297 aaKnown RBP11.1□□□□□ -0.63
NOD1-206ENST00000434755 SNTG2Q9NY99 539 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 ATP11BQ9Y2G3 1177 aa11.1□□□□□ -0.63
NOD1-206ENST00000434755 GOLGA8QA0A0J9YX86 632 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 GOLGA8OA6NCC3 632 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 GMNCA6NCL1 334 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 GOLGA8NF8WBI6 632 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 APOL1O14791 398 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 PSMD3O43242 534 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 CAPN15O75808 1086 aa11.09□□□□□ -0.63
NOD1-206ENST00000434755 SLC2A3P11169 496 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms