RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PRCPP42785 496 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 SOX9P48436 509 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 NOP14P78316 857 aaKnown RBP18.7■□□□□ 0.58
NUP50-208ENST00000430547 IFRD2Q12894 506 aaPredicted RBP18.7■□□□□ 0.58
NUP50-208ENST00000430547 STIM1Q13586 685 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 LRRC32Q14392 662 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 ITPRIPL2Q3MIP1 535 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 C1orf220Q5T0J3 134 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 SLITRK1Q96PX8 696 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 IER2Q9BTL4 223 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 B3GNT5Q9BYG0 378 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 DNAI2Q9GZS0 605 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 TMEM8AQ9HCN3 771 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 GKN1Q9NS71 199 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 FBXO4Q9UKT5 387 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 PCDHA5Q9Y5H7 936 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 MYO16Q9Y6X6 1858 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 SHISA7A6NL88 538 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 ABL1P00519 1130 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 CTHP32929 405 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 PPP3CCP48454 512 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 NDST1P52848 882 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 USP46P62068 366 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 TNK2Q07912 1038 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 PPP3CAQ08209 521 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 PPP2R5DQ14738 602 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 SPOPLQ6IQ16 392 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 ACOT1Q86TX2 421 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 FAM35AQ86V20 835 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
NUP50-208ENST00000430547 ERCC4Q92889 916 aaPredicted RBP18.69■□□□□ 0.58
NUP50-208ENST00000430547 EEF2KMTQ96G04 330 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 SMARCD1Q96GM5 515 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 TTLL2Q9BWV7 592 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 SDCBP2Q9H190 292 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 LMAN1LQ9HAT1 526 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.69■□□□□ 0.589e-9■■■■■ 111.8
NUP50-208ENST00000430547 CIZ1Q9ULV3 898 aaPredicted RBP18.69■□□□□ 0.58
NUP50-208ENST00000430547 VPS13AQ96RL7 3174 aa18.69■□□□□ 0.58
NUP50-208ENST00000430547 ZFHX2Q9C0A1 2572 aaPredicted RBP18.69■□□□□ 0.58
NUP50-208ENST00000430547 USP34Q70CQ2 3546 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 C2orf78A6NCI8 922 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 PRR23AA6NEV1 266 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 RTN3O95197 1032 aaPredicted RBP18.68■□□□□ 0.58
NUP50-208ENST00000430547 HDCP19113 662 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 GTF2H1P32780 548 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 ASPAP45381 313 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 MXI1P50539 228 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 CSTF1Q05048 431 aaKnown RBP18.68■□□□□ 0.58
NUP50-208ENST00000430547 RUNX3Q13761 415 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 MTF1Q14872 753 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 COBLL1Q53SF7 1204 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 TCERG1LQ5VWI1 586 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 KRT39Q6A163 491 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 UNC93AQ86WB7 457 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 NUP93Q8N1F7 819 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 TAS1R2Q8TE23 839 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 CYP2S1Q96SQ9 504 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 NIF3L1Q9GZT8 377 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 CHRDQ9H2X0 955 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 SEMA4AQ9H3S1 761 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 EBF3Q9H4W6 596 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 DMAP1Q9NPF5 467 aaPredicted RBP18.68■□□□□ 0.58
NUP50-208ENST00000430547 R4GN57 208 aa18.68■□□□□ 0.58
NUP50-208ENST00000430547 MYO15AQ9UKN7 3530 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 PSMA7O14818 248 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 AP1G2O75843 785 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 PFKLP17858 780 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 IFNAR2P48551 515 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 CACNA2D1P54289 1103 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 FKBP3Q00688 224 aaKnown RBP18.67■□□□□ 0.58
NUP50-208ENST00000430547 AMPD2Q01433 879 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 TAF10Q12962 218 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 MTAPQ13126 283 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 ORC1Q13415 861 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 FZD5Q13467 585 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 PDGFRLQ15198 375 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 ZNF528Q3MIS6 628 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 DCAF17Q5H9S7 520 aaPredicted RBP18.67■□□□□ 0.58
NUP50-208ENST00000430547 TRIM68Q6AZZ1 485 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 ASCL5Q7RTU5 278 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 PDZD8Q8NEN9 1154 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 SPATA20Q8TB22 786 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 SLC22A12Q96S37 553 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 FAM83CQ9BQN1 747 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 CYP3A43Q9HB55 503 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 KRT82Q9NSB4 513 aa18.67■□□□□ 0.58
NUP50-208ENST00000430547 SLC16A3O15427 465 aaKnown RBP18.66■□□□□ 0.58
NUP50-208ENST00000430547 CHRNB1P11230 501 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 CCDC130P13994 396 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 YWHAQP27348 245 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 PPP1R2P41236 205 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 LRRC63Q05C16 580 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 USP4Q13107 963 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 PON2Q15165 354 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 ZNF77Q15935 545 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 DGKKQ5KSL6 1271 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 TXNDC11Q6PKC3 985 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 MAML2Q8IZL2 1156 aaPredicted RBP18.66■□□□□ 0.58
NUP50-208ENST00000430547 ZNF687Q8N1G0 1237 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms