RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 BMPR2Q13873 1038 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 VPS53Q5VIR6 699 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 TMEM108Q6UXF1 575 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 SRRM1Q8IYB3 904 aaKnown RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 FAM109AQ8N4B1 249 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 PCSK9Q8NBP7 692 aaKnown RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 BRIX1Q8TDN6 353 aaKnown RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 ADAM21Q9UKJ8 722 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 ANKRD6Q9Y2G4 727 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 ABCC5O15440 1437 aa6.15□□□□□ -1.43
HMGB3P5-201ENST00000428894 ATRNO75882 1429 aa6.15□□□□□ -1.43
HMGB3P5-201ENST00000428894 MST1RQ04912 1400 aa6.15□□□□□ -1.43
HMGB3P5-201ENST00000428894 EBLN1P0CF75 366 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 SRSF4Q08170 494 aaKnown RBP6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 PLAC9Q5JTB6 97 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 HPS3Q969F9 1004 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 SLC35A4Q96G79 324 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 CDK5RAP3Q96JB5 506 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 SLC46A1Q96NT5 459 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 NELL2Q99435 816 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 MAP3K14Q99558 947 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 NUP88Q99567 741 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 TTYH3Q9C0H2 523 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 HESX1Q9UBX0 185 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 PCDHA6Q9UN73 950 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 LRP5O75197 1615 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 CROCC2H7BZ55 1655 aa6.14□□□□□ -1.43
HMGB3P5-201ENST00000428894 MANSC4A6NHS7 340 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 PPM1DO15297 605 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 ALDH2P05091 517 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 PDHA1P08559 390 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 PIM1P11309 404 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 ABCG1P45844 678 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 CCT8P50990 548 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 EIF2B5Q13144 721 aaKnown RBP6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 PTF1AQ7RTS3 328 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 ZNF551Q7Z340 670 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 GRAMD1CQ8IYS0 662 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 KLHDC4Q8TBB5 520 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 HASPINQ8TF76 798 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 ATRIPQ8WXE1 791 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 SARS2Q9NP81 518 aaKnown RBP6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 SERHLQ9NQF3 203 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 ARHGEF3Q9NR81 526 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 SERTAD4Q9NUC0 356 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 PADI4Q9UM07 663 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 DAPK1P53355 1430 aa6.13□□□□□ -1.43
HMGB3P5-201ENST00000428894 DCLK1O15075 740 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 DNAJB5O75953 348 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 CT47B1P0C2W7 299 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 NDUFB7P17568 137 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 KCNJ5P48544 419 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 ZNF134P52741 427 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 SOX8P57073 446 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 AOX1Q06278 1338 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 LONRF3Q496Y0 759 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 AMOTQ4VCS5 1084 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 KHDC1LQ5JSQ8 128 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 EMC10Q5UCC4 262 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 FCRLBQ6BAA4 426 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 SFRP4Q6FHJ7 346 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 LAYNQ6UX15 382 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 DEFB132Q7Z7B7 95 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 UNC5CLQ8IV45 518 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 PTPRUQ92729 1446 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 CGRRF1Q99675 332 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 ARMT1Q9H993 441 aa6.12□□□□□ -1.43
HMGB3P5-201ENST00000428894 PTPN23Q9H3S7 1636 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ADGRL3Q9HAR2 1447 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 LRPPRCP42704 1394 aaKnown RBP6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 NPHP3Q7Z494 1330 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 OFD1O75665 1012 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ALDH1L1O75891 902 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ABLIM3O94929 683 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 NXPH3O95157 252 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 UNC5CO95185 931 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 HNRNPCP07910 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 FAM163BP0C2L3 166 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 DRD4P21917 467 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 YY1P25490 414 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ALDH9A1P49189 494 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ANAPC15P60006 121 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ATAT1Q5SQI0 421 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 IFIT1BQ5T764 474 aaKnown RBP6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 TEDDM1Q5T9Z0 273 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 ICE2Q659A1 982 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 DTX2Q86UW9 622 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 DPF1Q92782 380 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 C1GALT1C1Q96EU7 318 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 STXBP5LQ9Y2K9 1186 aa6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 MARF1Q9Y4F3 1742 aaKnown RBP6.11□□□□□ -1.43
HMGB3P5-201ENST00000428894 LAMC1P11047 1609 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 C1orf167Q5SNV9 1468 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 BCL9LQ86UU0 1499 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 hCG_2014768A0A024R1R8 64 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 WIPF3A6NGB9 483 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 CGB1A6NKQ9 187 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 PRKCGP05129 697 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 ATXN1LP0C7T5 689 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms