RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RIN3Q8TB24 985 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 SH3RF2Q8TEC5 729 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 RUBCNQ92622 972 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 CCDC34Q96HJ3 373 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 SDCBP2Q9H190 292 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 HPS4Q9NQG7 708 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 NCDNQ9UBB6 729 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 CHORDC1Q9UHD1 332 aaPredicted RBP9.89□□□□□ -0.83
NUP50-206ENST00000422489 TRAF3IP3Q9Y228 551 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 WNT6Q9Y6F9 365 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 DOCK8Q8NF50 2099 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 PDCD11Q14690 1871 aaKnown RBP9.88□□□□□ -0.83
NUP50-206ENST00000422489 OTOL1A6NHN0 477 aaPredicted RBP9.88□□□□□ -0.83
NUP50-206ENST00000422489 CHURC1-FNTBB4DL54 471 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 TRIM49P0CI25 452 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 TRIM49CP0CI26 452 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 NR2F2P24468 414 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 RPL13P26373 211 aaKnown RBP9.88□□□□□ -0.83
NUP50-206ENST00000422489 PIK3CAP42336 1068 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 GCLMP48507 274 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 FNTBP49356 437 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 CACNA2D1P54289 1103 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 CLDN10P78369 228 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 TAF10Q12962 218 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 NR1H3Q13133 447 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 ADAM9Q13443 819 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 LPAL2Q16609 132 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 SPOPLQ6IQ16 392 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 FAM186BQ8IYM0 893 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 NUP93Q8N1F7 819 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 CPA6Q8N4T0 437 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 ZBTB44Q8NCP5 570 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 TNIP3Q96KP6 325 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 KCNK16Q96T55 309 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 IER2Q9BTL4 223 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 FAM126AQ9BYI3 521 aaPredicted RBP9.88□□□□□ -0.83
NUP50-206ENST00000422489 ELOVL4Q9GZR5 314 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 LINC00597Q9H2U6 94 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 FBRSL1Q9HCM7 1045 aaKnown RBP9.88□□□□□ -0.83
NUP50-206ENST00000422489 PRMT8Q9NR22 394 aaPredicted RBP9.88□□□□□ -0.83
NUP50-206ENST00000422489 GCNT4Q9P109 453 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 RAB23Q9ULC3 237 aa9.88□□□□□ -0.83
NUP50-206ENST00000422489 ATP8B3O60423 1300 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 WDFY4Q6ZS81 3184 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 ZNF840PA6NDX5 716 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 IKBKBO14920 756 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 AP1G2O75843 785 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 AKAP3O75969 853 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 HLA-DRAP01903 254 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 YWHAQP27348 245 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 PSMC2P35998 433 aaKnown RBP9.87□□□□□ -0.83
NUP50-206ENST00000422489 ID4P47928 161 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 PPP3CCP48454 512 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 PDE6CP51160 858 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 NDST1P52848 882 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 NOP14P78316 857 aaKnown RBP9.87□□□□□ -0.83
NUP50-206ENST00000422489 NUCB2P80303 420 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 DMWDQ09019 674 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 PNOCQ13519 176 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 ZACNQ401N2 412 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 WDR44Q5JSH3 913 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 C1orf220Q5T0J3 134 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 FSTL4Q6MZW2 842 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 MAMSTRQ6ZN01 415 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 PRR23BQ6ZRT6 265 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SMYD4Q8IYR2 804 aaPredicted RBP9.87□□□□□ -0.83
NUP50-206ENST00000422489 SYNPOQ8N3V7 929 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 GUF1Q8N442 669 aaKnown RBP9.87□□□□□ -0.83
NUP50-206ENST00000422489 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SCAMP5Q8TAC9 235 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 OSCP1Q8WVF1 389 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 TAF4BQ92750 862 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SECISBP2LQ93073 1101 aaKnown RBP9.87□□□□□ -0.83
NUP50-206ENST00000422489 FBXO32Q969P5 355 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 EXOC4Q96A65 974 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 CHFRQ96EP1 664 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 EEF2KMTQ96G04 330 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 CEP295NLQ96MC4 621 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SLITRK1Q96PX8 696 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 P2RY13Q9BPV8 354 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 RNF38Q9H0F5 515 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 ECT2Q9H8V3 914 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SMPD4Q9NXE4 827 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SLC8A2Q9UPR5 921 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 CPQQ9Y646 472 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 SCN1AP35498 2009 aa9.87□□□□□ -0.83
NUP50-206ENST00000422489 MYH15Q9Y2K3 1946 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 LEFTY2O00292 366 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 TRDMT1O14717 391 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 SCAMP3O14828 347 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 CETN3O15182 167 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 HRO43593 1189 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 LILRB5O75023 590 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 ATG13O75143 517 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 RTN3O95197 1032 aaPredicted RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 EGFP01133 1207 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 MBL2P11226 248 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms