RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 SDCBP2Q9H190 292 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 KIF9Q9HAQ2 790 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 TMEM8AQ9HCN3 771 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 TDP1Q9NUW8 608 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 FAM86C1Q9NVL1 165 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 MRPS17Q9Y2R5 130 aaKnown RBP9.78□□□□□ -0.84
BRCC3-207ENST00000411985 MTF2Q9Y483 593 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-207ENST00000411985 PIAS3Q9Y6X2 628 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
BRCC3-207ENST00000411985 TRIM49BA6NDI0 452 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 SHISA7A6NL88 538 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 FAM170BA6NMN3 283 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 F8VP50 259 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 CLDN5O00501 218 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 PSMA7O14818 248 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 NCAM2O15394 837 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 SLC16A3O15427 465 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 STX10O60499 249 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 TRIM21P19474 475 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 TARSP26639 723 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 GTF2H1P32780 548 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MAGEA9P43362 315 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MRE11P49959 708 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MXI1P50539 228 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 NDST1P52848 882 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 PMS1P54277 932 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 CACNA2D1P54289 1103 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MLLT6P55198 1093 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 FKBP3Q00688 224 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ZNF268Q14587 947 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ANKRD40Q6AI12 368 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ISM2Q6H9L7 571 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 C1orf228Q6PIY5 440 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 FAM35AQ86V20 835 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ALYREFQ86V81 257 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MON1AQ86VX9 555 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ZC3H3Q8IXZ2 948 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 FAM3CQ92520 227 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 USP13Q92995 863 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MSANTD3Q96H12 275 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ZFYVE19Q96K21 471 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 LRRC3BQ96PB8 259 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MED10Q9BTT4 135 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 TTLL2Q9BWV7 592 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 B3GNT5Q9BYG0 378 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 ZNF518BQ9C0D4 1074 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 TRPC7Q9HCX4 862 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 THG1LQ9NWX6 298 aaKnown RBP9.77□□□□□ -0.85
BRCC3-207ENST00000411985 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 MAN1B1Q9UKM7 699 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 CCL26Q9Y258 94 aa9.77□□□□□ -0.85
BRCC3-207ENST00000411985 SPAG17Q6Q759 2223 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 TRAV19A0A0A6YYK7 116 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 C2orf78A6NCI8 922 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 CKMP06732 381 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 USP17L7P0C7H9 530 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 CCNE1P24864 410 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 ANP32AP39687 249 aaKnown RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 RPS9P46781 194 aaKnown RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 PPP3CCP48454 512 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 PDE6CP51160 858 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 KPNA1P52294 538 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 USP46P62068 366 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 INCA1Q0VD86 236 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 IFRD2Q12894 506 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 ORC1Q13415 861 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 DCAF17Q5H9S7 520 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 TCERG1LQ5VWI1 586 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 ACOT1Q86TX2 421 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 C1orf210Q8IVY1 113 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 NUP93Q8N1F7 819 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 FBXL13Q8NEE6 735 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 CLDN23Q96B33 292 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 SMARCD1Q96GM5 515 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 DHTKD1Q96HY7 919 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 NIF3L1Q9GZT8 377 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 C8orf33Q9H7E9 229 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 APOBEC3GQ9HC16 384 aaKnown RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.76□□□□□ -0.852e-6■■■■■ 96.1
BRCC3-207ENST00000411985 TMEM30AQ9NV96 361 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 GTSE1Q9NYZ3 720 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 TRPM5Q9NZQ8 1165 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 HMGXB4Q9UGU5 601 aa9.76□□□□□ -0.85
BRCC3-207ENST00000411985 NDRG2Q9UN36 371 aaKnown RBP9.76□□□□□ -0.85
BRCC3-207ENST00000411985 F5P12259 2224 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 SPECC1L-ADORA2AF8WAN1 911 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 RTN3O95197 1032 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-207ENST00000411985 CCDC130P13994 396 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 PFKLP17858 780 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 NBL1P41271 181 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 SOX9P48436 509 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 UBE2HP62256 183 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 USP4Q13107 963 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 FZD5Q13467 585 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 MORC3Q14149 939 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 MTF1Q14872 753 aa9.75□□□□□ -0.85
BRCC3-207ENST00000411985 ZNF77Q15935 545 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms