RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 DBN1Q16643 649 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 HABP4Q5JVS0 413 aaKnown RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 HP1BP3Q5SSJ5 553 aaPredicted RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 CEP68Q76N32 757 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 ZBED8Q8IZ13 594 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 PTPRN2Q92932 1015 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 C11orf84Q9BUA3 381 aaPredicted RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 ADGRG1Q9Y653 693 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 DDHD2O94830 711 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 TMEM253P0C7T8 217 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 GFAPP14136 432 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 FBXW4P57775 412 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 ARID5BQ14865 1188 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 FASTKD1Q53R41 847 aaKnown RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 RASSF3Q86WH2 238 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 CALML6Q8TD86 181 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 NFKBIZQ9BYH8 718 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 PRDM10Q9NQV6 1147 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 TLL2Q9Y6L7 1015 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 WDR91A4D1P6 747 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 C2orf81A6NN90 581 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 CYP11B1P15538 503 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 HADHAP40939 763 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 VEGFBP49765 207 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 ZNF697Q5TEC3 545 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 KCTD16Q68DU8 428 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 TIGD7Q6NT04 549 aaPredicted RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
GABPA-202ENST00000400075 ZCCHC17Q9NP64 241 aaKnown RBP14.98□□□□□ -0.01
GABPA-202ENST00000400075 PPP1R3GB7ZBB8 358 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 NCAM2O15394 837 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 PTPN1P18031 435 aaKnown RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 POLR2EP19388 210 aaKnown RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 MTFR1Q15390 333 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 NUGGCQ68CJ6 796 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 CENPPQ6IPU0 288 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 TPGS1Q6ZTW0 290 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 ERGIC2Q96RQ1 377 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 PAK5Q9P286 719 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 KIAA0100Q14667 2235 aaKnown RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 CYP3A7-CYP3A51PA0A087WV96 503 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 CYP3A7P24462 503 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 PON1P27169 355 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 CHKAP35790 457 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 EIF2B5Q13144 721 aaKnown RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 SPATA16Q9BXB7 569 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 SOWAHBA6NEL2 793 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 RAMP2O60895 175 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 SMIM24O75264 130 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 NDUFS2O75306 463 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 SGPL1O95470 568 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 LSM8O95777 96 aaKnown RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 PNMA6AP0CW24 399 aaPredicted RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 EIF3BP55884 814 aaKnown RBP14.97□□□□□ -0.01
GABPA-202ENST00000400075 BLOC1S5Q8TDH9 187 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 SCLYQ96I15 445 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 CHP1Q99653 195 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 ARHGEF38Q9NXL2 777 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 GTSE1Q9NYZ3 720 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 STK39Q9UEW8 545 aa14.97□□□□□ -0.01
GABPA-202ENST00000400075 ARVCFO00192 962 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 HTRA3P83110 453 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 HIF1AQ16665 826 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 ATG16L1Q676U5 607 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 DDX42Q86XP3 938 aaKnown RBP eCLIP14.96□□□□□ -0.01
GABPA-202ENST00000400075 GIMAP7Q8NHV1 300 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 RXFP2Q8WXD0 754 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 OR6C75A6NL08 312 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 MRPS25P82663 173 aaKnown RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 TMEM119Q4V9L6 283 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 GLE1Q53GS7 698 aaKnown RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 ERAP2Q6P179 960 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.01
GABPA-202ENST00000400075 ATXN7L3BQ96GX2 97 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 AKAP7Q9P0M2 348 aaPredicted RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 PIK3C2AO00443 1686 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 DDX5P17844 614 aaKnown RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 COMTP21964 271 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 HIRAP54198 1017 aaPredicted RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 PTK7Q13308 1070 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 RAB30Q15771 203 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 ZKSCAN8Q15776 578 aaPredicted RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 C2CD6Q53TS8 623 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 KIAA1324Q6UXG2 1013 aaKnown RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 C1orf186Q6ZWK4 172 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 SCUBE2Q9NQ36 999 aa14.96□□□□□ -0.01
GABPA-202ENST00000400075 TRMT13Q9NUP7 481 aaKnown RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 ZNF214Q9UL59 606 aaPredicted RBP14.96□□□□□ -0.01
GABPA-202ENST00000400075 CCDC160A6NGH7 325 aa14.96□□□□□ -0.02
GABPA-202ENST00000400075 LUC7L3O95232 432 aaKnown RBP14.96□□□□□ -0.02
GABPA-202ENST00000400075 TTC4O95801 387 aa14.96□□□□□ -0.02
GABPA-202ENST00000400075 CHRM3P20309 590 aa14.96□□□□□ -0.02
GABPA-202ENST00000400075 OR1E1P30953 314 aa14.96□□□□□ -0.02
GABPA-202ENST00000400075 SCNN1BP51168 640 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms