RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NOCTQ9UK39 431 aaKnown RBP14.66□□□□□ -0.06
SCAF4-202ENST00000399804 ADAMTS5Q9UNA0 930 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 KRT38O76015 456 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 SLC4A1P02730 911 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 COPS2P61201 443 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 PTGISQ16647 500 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 B3GNT9Q6UX72 402 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 L3MBTL3Q96JM7 780 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-202ENST00000399804 PLCD4Q9BRC7 762 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 PITPNM3Q9BZ71 974 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 FZD8Q9H461 694 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 SETSIPP0DME0 302 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 CCDC130P13994 396 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 DARSP14868 501 aaKnown RBP14.65□□□□□ -0.06
SCAF4-202ENST00000399804 CHRNB2P17787 502 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 GRM5P41594 1212 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
SCAF4-202ENST00000399804 COG7P83436 770 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 NLRP14Q86W24 1093 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 PPP4R1Q8TF05 950 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 SYT15Q9BQS2 421 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 TRIM62Q9BVG3 475 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 PDZD7Q9H5P4 517 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 WHRNQ9P202 907 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 FNDC3AQ9Y2H6 1198 aaKnown RBP14.65□□□□□ -0.06
SCAF4-202ENST00000399804 GOLGA8RI6L899 631 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 DFFAO00273 331 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 SKIP12755 728 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 BORCS6Q96GS4 357 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 FAM53CQ9NYF3 392 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 DONSONQ9NYP3 566 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 DNPEPQ9ULA0 475 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 SIGLEC16A6NMB1 481 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 COPEO14579 308 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 APOEP02649 317 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 SERPINB6P35237 376 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 HSPA9P38646 679 aaKnown RBP14.65□□□□□ -0.06
SCAF4-202ENST00000399804 MLH1P40692 756 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 LHX1P48742 406 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 SEC24CP53992 1094 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 AGBL2Q5U5Z8 902 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 CYTH2Q99418 400 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 PCYT2Q99447 389 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 ADAM2Q99965 735 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 CDC42EP4Q9H3Q1 356 aaKnown RBP14.65□□□□□ -0.06
SCAF4-202ENST00000399804 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 STK38LQ9Y2H1 464 aa14.65□□□□□ -0.06
SCAF4-202ENST00000399804 STAMBPO95630 424 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 MMP8P22894 467 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TKTL1P51854 596 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 C18orf25Q96B23 403 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ZBED2Q9BTP6 218 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SAE1Q9UBE0 346 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ZC3H7BQ9UGR2 993 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 COL1A2P08123 1366 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 BCORQ6W2J9 1755 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ATG7O95352 703 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 EPHB2P29323 1055 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TAS2R40P59535 323 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ADIGQ0VDE8 80 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 THOC5Q13769 683 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 C15orf59Q2T9L4 293 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 C4orf50Q6ZRC1 276 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 PPIL6Q8IXY8 311 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 KATNAL2Q8IYT4 538 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ARRDC4Q8NCT1 418 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 MDM1Q8TC05 714 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SENP8Q96LD8 212 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SMIM35A0A1B0GVV1 85 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TYW5A2RUC4 315 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ATP9BO43861 1147 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 HMBSP08397 361 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 CHN1P15882 459 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SCNN1GP51170 649 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ATN1P54259 1190 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ZNF200P98182 395 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SNX17Q15036 470 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 NBPF20Q3BBV1 942 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 MGAT5BQ3V5L5 792 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 WSCD1Q658N2 575 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TMEM192Q8IY95 271 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 DCP1BQ8IZD4 617 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 GPATCH11Q8N954 259 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 EPS8L3Q8TE67 593 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 MCUR1Q96AQ8 359 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TLK1Q9UKI8 766 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 ST3GAL5Q9UNP4 418 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 AP4E1Q9UPM8 1137 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TSPAN1O60635 241 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 VNN1O95497 513 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 RPLP2P05387 115 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 LSP1P33241 339 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 CRYBB1P53674 252 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 VCPP55072 806 aaKnown RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SP3Q02447 781 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 PDK2Q15119 407 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TMC3Q7Z5M5 1100 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 EFCAB13Q8IY85 973 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms