RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 OGTO15294 1046 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 AKAP10O43572 662 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 KRT34O76011 436 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 APOA1P02647 267 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 TXNP10599 105 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 SERPINB3P29508 390 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 HMGCS2P54868 508 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 NAPEPLDQ6IQ20 393 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 EFL1Q7Z2Z2 1120 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 SCUBE1Q8IWY4 988 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SNX19Q92543 992 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 JADE3Q92613 823 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 CBWD1Q9BRT8 395 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ARHGEF38Q9NXL2 777 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SCHIP1Q9P0W5 487 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 CHORDC1Q9UHD1 332 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 ZSCAN5CA6NGD5 496 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 H2AFYO75367 372 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 FAM153BP0C7A2 387 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 KCNA2P16389 499 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 MAP4P27816 1152 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 HNRNPH3P31942 346 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 ERFP50548 548 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 C1QBPQ07021 282 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 ZNF235Q14590 738 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 FAM153CQ494X1 144 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ZCWPW2Q504Y3 356 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 FOXR2Q6PJQ5 311 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 FBXO36Q8NEA4 188 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 APPL2Q8NEU8 664 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SPDYE1Q8NFV5 336 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 MMP19Q99542 508 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 MYOZ2Q9NPC6 264 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 INTS13Q9NVM9 706 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ZNF70Q9UC06 446 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 ZNF212Q9UDV6 495 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 FAM153AQ9UHL3 310 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 PPME1Q9Y570 386 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.01
VPS36-201ENST00000378060 HNRNPRO43390 633 aaKnown RBP8.71□□□□□ -1.01
VPS36-201ENST00000378060 SRP72O76094 671 aaKnown RBP8.71□□□□□ -1.01
VPS36-201ENST00000378060 ICAM1P05362 532 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 BMP6P22004 513 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 MTMR2Q13614 643 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 FLOT2Q14254 428 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 SMTNL2Q2TAL5 461 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 ZNF668Q96K58 619 aaPredicted RBP8.71□□□□□ -1.01
VPS36-201ENST00000378060 PAFAH2Q99487 392 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 CCT7Q99832 543 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 BLOC1S4Q9NUP1 217 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 DTNAQ9Y4J8 743 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 PCDHA3Q9Y5H8 950 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 NAV1Q8NEY1 1877 aa8.71□□□□□ -1.01
VPS36-201ENST00000378060 POLR2AP24928 1970 aaKnown RBP8.71□□□□□ -1.01
VPS36-201ENST00000378060 PIK3CDO00329 1044 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 DDX3XO00571 662 aaKnown RBP eCLIP8.71□□□□□ -1.021e-27■■■■■ 64.1
VPS36-201ENST00000378060 WNT10BO00744 389 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 CPA2P48052 419 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 OVGP1Q12889 678 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 ARHGEF6Q15052 776 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 SHROOM1Q2M3G4 852 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 C4orf19Q8IY42 314 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 FUKQ8N0W3 1084 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 ZNF280CQ8ND82 737 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 ZNF669Q96BR6 464 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 FAR2Q96K12 515 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 EGFL8Q99944 293 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 AVENQ9NQS1 362 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 C20orf96Q9NUD7 363 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS36-201ENST00000378060 EEF2KO00418 725 aaKnown RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 HBP1O60381 514 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 ESRRBO95718 433 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 UBTFL6P0CB48 400 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 NPTX2P47972 431 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 DRG2P55039 364 aaKnown RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 RPS6P62753 249 aaKnown RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 CLEC16AQ2KHT3 1053 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 ZBTB41Q5SVQ8 909 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 WLSQ5T9L3 541 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 LINC00523Q86TU6 105 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 TSEN2Q8NCE0 465 aaKnown RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 EFCAB1Q9HAE3 211 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 METTL5Q9NRN9 209 aaKnown RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.71□□□□□ -1.02
VPS36-201ENST00000378060 ZNF711Q9Y462 761 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 GAKO14976 1311 aa8.71□□□□□ -1.02
VPS36-201ENST00000378060 BTNL10A8MVZ5 291 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SLCO1B7G3V0H7 640 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 TIMM44O43615 452 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 MYO1DO94832 1006 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ATP5BP06576 529 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 NAMPTP43490 491 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 RECQLP46063 649 aaPredicted RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 NEK2P51955 445 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms