RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KIAA0391O15091 583 aaKnown RBP14.74□□□□□ -0.05
CXCL12-202ENST00000374426 RHOBTB1O94844 696 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 KCNK5O95279 499 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 NFATC1O95644 943 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 CAVIN2O95810 425 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 PDGFRBP09619 1106 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 WARSP23381 471 aaKnown RBP14.74□□□□□ -0.05
CXCL12-202ENST00000374426 DGKEP52429 567 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 CREB5Q02930 508 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 DUOXA2Q1HG44 320 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 DENND5BQ6ZUT9 1274 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 TSTD1Q8NFU3 115 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 USP33Q8TEY7 942 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 CEP295NLQ96MC4 621 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 TTLL2Q9BWV7 592 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 INVSQ9Y283 1065 aa14.74□□□□□ -0.05
CXCL12-202ENST00000374426 R3HCC1Q9Y3T6 440 aaKnown RBP14.74□□□□□ -0.05
CXCL12-202ENST00000374426 MORC2Q9Y6X9 1032 aaPredicted RBP14.74□□□□□ -0.05
CXCL12-202ENST00000374426 GON4LQ3T8J9 2241 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 ZNF233A6NK53 670 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 LEFTY2O00292 366 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 TNNC2P02585 160 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 PFKLP17858 780 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 SYT1P21579 422 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 GBP1P32455 592 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 HOXD13P35453 343 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 GRIK1P39086 918 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 PDE6CP51160 858 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 SEC13P55735 322 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 CYP27A1Q02318 531 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 SLC39A14Q15043 492 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 MAPRE1Q15691 268 aaKnown RBP14.73□□□□□ -0.05
CXCL12-202ENST00000374426 C2orf27AQ580R0 203 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 RASSF3Q86WH2 238 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 CCDC65Q8IXS2 484 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 PDILTQ8N807 584 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 CCDC26Q8TAB7 109 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 HPS3Q969F9 1004 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 PCED1BQ96HM7 432 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 USP28Q96RU2 1077 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 EDEM2Q9BV94 578 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 TPSD1Q9BZJ3 242 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 RNF38Q9H0F5 515 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 HSPBP1Q9NZL4 362 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 TRPM5Q9NZQ8 1165 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 NME7Q9Y5B8 376 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 ZFYVE26Q68DK2 2539 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 FAM208BQ5VWN6 2430 aa14.73□□□□□ -0.05
CXCL12-202ENST00000374426 PTPRDP23468 1912 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 HELZP42694 1942 aaKnown RBP14.72□□□□□ -0.05
CXCL12-202ENST00000374426 LNP1A1A4G5 178 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 ZNF840PA6NDX5 716 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 F8VP50 259 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 OLFM2O95897 454 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 CYP17A1P05093 508 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 NOP14P78316 857 aaKnown RBP14.72□□□□□ -0.05
CXCL12-202ENST00000374426 SLC7A9P82251 487 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 MESP2Q0VG99 397 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 SURF1Q15526 300 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 USP39Q53GS9 565 aaKnown RBP14.72□□□□□ -0.05
CXCL12-202ENST00000374426 PMS2CLQ68D20 193 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 ANO7Q6IWH7 933 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 PSAPL1Q6NUJ1 521 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 TRAPPC11Q7Z392 1133 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 WDR49Q8IV35 697 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 SFTPA1Q8IWL2 248 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 ADGRG2Q8IZP9 1017 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 MYCBPAPQ8TBZ2 947 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 MMS19Q96T76 1030 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 MRPL45Q9BRJ2 306 aaKnown RBP14.72□□□□□ -0.05
CXCL12-202ENST00000374426 TMEM30AQ9NV96 361 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 MMP17Q9ULZ9 603 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 SPEGQ15772 3267 aa14.72□□□□□ -0.05
CXCL12-202ENST00000374426 WDFY3Q8IZQ1 3526 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 AKAP13Q12802 2813 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 C4orf47A7E2U8 309 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 SCAMP3O14828 347 aaKnown RBP14.71□□□□□ -0.05
CXCL12-202ENST00000374426 TRIM66O15016 1216 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CST3P01034 146 aaPredicted RBP14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CHRM1P11229 460 aaPredicted RBP14.71□□□□□ -0.05
CXCL12-202ENST00000374426 HNRNPLP14866 589 aaKnown RBP eCLIP14.71□□□□□ -0.05
CXCL12-202ENST00000374426 BCKDHBP21953 392 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 ANXA13P27216 316 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CACNA2D1P54289 1103 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CRY1Q16526 586 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 MDH1BQ5I0G3 518 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 STXBP4Q6ZWJ1 553 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CCDC33Q8N5R6 958 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 KIAA1958Q8N8K9 716 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 MDGA1Q8NFP4 955 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CNOT6LQ96LI5 555 aaKnown RBP14.71□□□□□ -0.05
CXCL12-202ENST00000374426 C8orf48Q96LL4 319 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 SMPD4Q9NXE4 827 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CPQQ9Y646 472 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 NUP205Q92621 2012 aa14.71□□□□□ -0.05
CXCL12-202ENST00000374426 CACNA1EQ15878 2313 aa14.7□□□□□ -0.06
CXCL12-202ENST00000374426 GIPC1O14908 333 aa14.7□□□□□ -0.06
CXCL12-202ENST00000374426 TACC1O75410 805 aa14.7□□□□□ -0.06
CXCL12-202ENST00000374426 OAS1P00973 400 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms