RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 DENRO43583 198 aaKnown RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 FBXO21O94952 628 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 KITP10721 976 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 ALDH18A1P54886 795 aaKnown RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 PFKPQ01813 784 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 B3GNT6Q6ZMB0 384 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 POU5F2Q8N7G0 328 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 GRIP2Q9C0E4 1043 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 MIS12Q9H081 205 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 CD209Q9NNX6 404 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 SEL1LQ9UBV2 794 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 TCRBV9S1A1TA0A576 114 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 KCNQ2O43526 872 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 UGT1A9O60656 530 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 RFPL1O75677 317 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 IL1R1P14778 569 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 AQP5P55064 265 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 PHEXP78562 749 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 CDKL1Q00532 357 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ASPHQ12797 758 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 KBTBD12Q3ZCT8 623 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 AAGABQ6PD74 315 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ARID3BQ8IVW6 561 aaPredicted RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 NME8Q8N427 588 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 UGT1A7Q9HAW7 530 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 UGT1A10Q9HAW8 530 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 UGT1A8Q9HAW9 530 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 XPNPEP1Q9NQW7 623 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 H3BSA7 217 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ZBTB16Q05516 673 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 HIF1AQ16665 826 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF410Q86VK4 478 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 HPS6Q86YV9 775 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 RHOT1Q8IXI2 618 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 CPNE9Q8IYJ1 553 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 TRIM56Q9BRZ2 755 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 LIN28AQ9H9Z2 209 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 AHDC1Q5TGY3 1603 aaPredicted RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 TMX2-CTNND1H3BSU7 103 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ENTPD3O75355 529 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 AVILO75366 819 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ALDH2P05091 517 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ITGAVP06756 1048 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 GJC1P36383 396 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 VCPP55072 806 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 PSMC5P62195 406 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 SFSWAPQ12872 951 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 MPP3Q13368 585 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 PLA2G4FQ68DD2 849 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 PLEKHA7Q6IQ23 1121 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 RHPN2Q8IUC4 686 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 TAB3Q8N5C8 712 aaPredicted RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 SNRNP27Q8WVK2 155 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 SLC44A1Q8WWI5 657 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 NKD2Q969F2 451 aaPredicted RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 TMIGD2Q96BF3 282 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 SRPK1Q96SB4 655 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 POMPQ9Y244 141 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 INPP5FQ9Y2H2 1132 aa12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 HBS1LQ9Y450 684 aaKnown RBP12.19□□□□□ -0.46
SMARCA1-201ENST00000371121 hCG_1818297A0A087WSY0 165 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 F8VP50 259 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 K7ENM7 598 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF195O14628 629 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ITM2AO43736 263 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 STRNO43815 780 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 FKBP6O75344 327 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ARP10275 920 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CDH2P19022 906 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ACO1P21399 889 aaKnown RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CDKN2BP42772 138 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CBX3Q13185 183 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 LILRA2Q8N149 483 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF512Q96ME7 567 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 PPARGC1AQ9UBK2 798 aaKnown RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF148Q9UQR1 794 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 DRG1Q9Y295 367 aaKnown RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 PTPRJQ12913 1337 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 PFDN1O60925 122 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 MFAP3P55082 362 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ADARP55265 1226 aaKnown RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ANKDD1AQ495B1 522 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 TMEM259Q4ZIN3 620 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CENPUQ71F23 418 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 PASD1Q8IV76 773 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms