RNA–Protein interactions for RNA: ENST00000354334.7

HDAC7-202, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC7, Length 4,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-202ENST00000354334 PAMP19021 973 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 MIPP30301 263 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 NUMBP49757 651 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
HDAC7-202ENST00000354334 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-202ENST00000354334 PDK1Q15118 436 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-202ENST00000354334 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
HDAC7-202ENST00000354334 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 FAM129AQ9BZQ8 928 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 SP110Q9HB58 689 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
HDAC7-202ENST00000354334 RASSF10A6NK89 507 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 PECAM1P16284 738 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 NOMO3P69849 1222 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 PRAMEP78395 509 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 PRUNE1Q86TP1 453 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 AJAP1Q9UKB5 411 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 C3orf70A6NLC5 250 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 RECQL4O94761 1208 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 CYP1A2P05177 515 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 THP07101 528 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 GEMIN4P57678 1058 aaKnown RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 ZNF268Q14587 947 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 TRPM8Q7Z2W7 1104 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 ABI2Q9NYB9 513 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 TNFSF13BQ9Y275 285 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 SNRPAP09012 282 aaKnown RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 TPD52P55327 224 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-202ENST00000354334 MAP3K7CLP57077 242 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 DRP2Q13474 957 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 HELQQ8TDG4 1101 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 ERP27Q96DN0 273 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 TUBB6Q9BUF5 446 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 NCANO14594 1321 aa13.66□□□□□ -0.22
HDAC7-202ENST00000354334 ADSSP30520 456 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 SSTR1P30872 391 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 MORF4L2Q15014 288 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 TTMPQ5BVD1 217 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 FOXR1Q6PIV2 292 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 TSSK1BQ9BXA7 367 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 NAALADL1Q9UQQ1 740 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 ZNF536O15090 1300 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 MYH3P11055 1940 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 PLPPR4Q7Z2D5 763 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 DHX33Q9H6R0 707 aaKnown RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 WDCPQ9H6R7 721 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 BCAP29Q9UHQ4 241 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 RAB44Q7Z6P3 723 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 COG5Q9UP83 839 aa13.65□□□□□ -0.22
HDAC7-202ENST00000354334 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
HDAC7-202ENST00000354334 CHUKO15111 745 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 KLC3Q6P597 504 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 RIBC1Q8N443 379 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-202ENST00000354334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC7-202ENST00000354334 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
HDAC7-202ENST00000354334 ZNF669Q96BR6 464 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-202ENST00000354334 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 ST6GALNAC4Q9H4F1 302 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 SIX2Q9NPC8 291 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 SMAPO00193 183 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 POMCP01189 267 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 PAEPP09466 180 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 OVGP1Q12889 678 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 SLC12A1Q13621 1099 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 PDK2Q15119 407 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 GPR20Q99678 358 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 PCDH9Q9HC56 1237 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 MROH7Q68CQ1 1323 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 ETS1P14921 441 aa13.64□□□□□ -0.23
HDAC7-202ENST00000354334 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms