RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SEMA4DQ92854 862 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 SMARCD1Q96GM5 515 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 DNAI2Q9GZS0 605 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 TRPC7Q9HCX4 862 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 TDP1Q9NUW8 608 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 HMGXB4Q9UGU5 601 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 FAM170BA6NMN3 283 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 GLULP15104 373 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 CD72P21854 359 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 PPP3CCP48454 512 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 USP46P62068 366 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 ZNF268Q14587 947 aaPredicted RBP29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 FRMD5Q7Z6J6 570 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 USP13Q92995 863 aaPredicted RBP29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 NT5C1AQ9BXI3 368 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 TMEM30AQ9NV96 361 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 TRPM5Q9NZQ8 1165 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 PIAS3Q9Y6X2 628 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 WDFY4Q6ZS81 3184 aa29.34■■■□□ 2.29
ATPAF1-201ENST00000329231 TRAV19A0A0A6YYK7 116 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 H0Y858 1186 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 PDE6CP51160 858 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 MLLT6P55198 1093 aaPredicted RBP29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 ORC1Q13415 861 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 CAMK4Q16566 473 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 TTI2Q6NXR4 508 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 PAQR9Q6ZVX9 377 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 FUKQ8N0W3 1084 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 NUP93Q8N1F7 819 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 DUSP9Q99956 384 aaKnown RBP29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 DMAP1Q9NPF5 467 aaPredicted RBP29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 DLGAP2Q9P1A6 1054 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 KIAA1468Q9P260 1216 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 CTNND2Q9UQB3 1225 aa29.33■■■□□ 2.29
ATPAF1-201ENST00000329231 NCAM2O15394 837 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 LRRN2O75325 713 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 USP17L7P0C7H9 530 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 CCDC40Q4G0X9 1142 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 CBWD6Q4V339 395 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 CBWD3Q5JTY5 395 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 CBWD5Q5RIA9 395 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 TTC39CQ8N584 583 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 ATOH1Q92858 354 aaPredicted RBP29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 SLC35C1Q96A29 364 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 MSANTD3Q96H12 275 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 SLITRK1Q96PX8 696 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 KCNK16Q96T55 309 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 KRT82Q9NSB4 513 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 CCL26Q9Y258 94 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 COQ4Q9Y3A0 265 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 MTF2Q9Y483 593 aaPredicted RBP29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 DENND4CQ5VZ89 1909 aa29.32■■■□□ 2.28
ATPAF1-201ENST00000329231 CILPO75339 1184 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 AP1G2O75843 785 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 RTN3O95197 1032 aaPredicted RBP29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 CKMP06732 381 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 CCDC130P13994 396 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 PFKLP17858 780 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 CD58P19256 250 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 PAK1Q13153 545 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 C1orf228Q6PIY5 440 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 SLC2A14Q8TDB8 520 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 ZFYVE19Q96K21 471 aa29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 C8orf33Q9H7E9 229 aaPredicted RBP29.31■■■□□ 2.28
ATPAF1-201ENST00000329231 TARSP26639 723 aaKnown RBP29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 MAGEA9P43362 315 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 KPNA1P52294 538 aaPredicted RBP29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 C12orf29Q8N999 325 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 FAM3CQ92520 227 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 TWNKQ96RR1 684 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 CYP2S1Q96SQ9 504 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 FAM124BQ9H5Z6 455 aaPredicted RBP29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 FAM49BQ9NUQ9 324 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 GCNT4Q9P109 453 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 COL4A3Q01955 1670 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 GREB1Q4ZG55 1949 aa29.3■■■□□ 2.28
ATPAF1-201ENST00000329231 OBSL1O75147 1896 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 C2orf78A6NCI8 922 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 SHISA7A6NL88 538 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 HDCP19113 662 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 YWHAQP27348 245 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 IFRD2Q12894 506 aaPredicted RBP29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 TAF10Q12962 218 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 ANGPT1Q15389 498 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 CC2D1AQ6P1N0 951 aaPredicted RBP29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 ARL14EPQ8N8R7 260 aaPredicted RBP29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 GBP4Q96PP9 640 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 SLC22A12Q96S37 553 aa29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 HNRNPABQ99729 332 aaKnown RBP29.29■■■□□ 2.28
ATPAF1-201ENST00000329231 ZNF840PA6NDX5 716 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 STX17P56962 302 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 PDZD8Q8NEN9 1154 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 WHAMMQ8TF30 809 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 OVCA2Q8WZ82 227 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 CYFIP2Q96F07 1278 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 CSNK1G1Q9HCP0 422 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 GKN1Q9NS71 199 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 COMMD8Q9NX08 183 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 GTSE1Q9NYZ3 720 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 NDRG2Q9UN36 371 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 548.2 ms