RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 PIKFYVEQ9Y2I7 2098 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TRAF2Q12933 501 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 POMGNT2Q8NAT1 580 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 DDX47Q9H0S4 455 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ABCB10Q9NRK6 738 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ZFC3H1O60293 1989 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 KANSL1LA0AUZ9 987 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ATP9AO75110 1047 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 GTF2H3Q13889 308 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 KCTD14Q9BQ13 255 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 OSBPL3Q9H4L5 887 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PCDHB6Q9Y5E3 794 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 KPNA1P52294 538 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 GTF2IP78347 998 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TFAMQ00059 246 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 LRIG3Q6UXM1 1119 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 LINC00301Q8NCQ3 95 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 OR2W6PQ8NHA6 318 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 BHMT2Q9H2M3 363 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 METTL21EPA6NDL7 271 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 AGTP01019 485 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 SERPIND1P05546 499 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ZFP69Q49AA0 526 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TIGD7Q6NT04 549 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 RAB11FIP2Q7L804 512 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ALAS1P13196 640 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TMIEQ8NEW7 156 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 WDR12Q9GZL7 423 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 SNX9Q9Y5X1 595 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 CDC25AP30304 524 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 GSTT1P30711 240 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 OTOAQ7RTW8 1153 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PLEKHG4BQ96PX9 1271 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PUS7LQ9H0K6 701 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PSMC3IPQ9P2W1 217 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 CRNNQ9UBG3 495 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 F5H423 210 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 CLIC2O15247 247 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PPM1BO75688 479 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PTGISQ16647 500 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ZBTB49Q6ZSB9 765 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TMEM110Q86TL2 294 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 YME1L1Q96TA2 773 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 ROGDIQ9GZN7 287 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PLOD3O60568 738 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 SNX17Q15036 470 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 PGBD4Q96DM1 585 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 RXRGP48443 463 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 TUFMP49411 452 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 TRIM65Q6PJ69 517 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 S100A13Q99584 98 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 MAN1C1Q9NR34 630 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 CACNA1IQ9P0X4 2223 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 PRODHO43272 600 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 CIAO1O76071 339 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 THEGLP0DJG4 465 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ATF6P18850 670 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 PI16Q6UXB8 463 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 GPN3Q9UHW5 284 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF211Q13398 564 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 KIAA1841Q6NSI8 718 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 GALNT6Q8NCL4 622 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 GRPEL2Q8TAA5 225 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 TBATAQ96M53 351 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 LRCH1Q9Y2L9 728 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 PCDHGA4Q9Y5G9 962 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 OR14I1A6ND48 311 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 HIST1H2AGP0C0S8 130 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 HIST1H2ADP20671 130 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 LRRC63Q05C16 580 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ANKRD40Q6AI12 368 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 BHLHB9Q6PI77 547 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 IZUMO2Q6UXV1 221 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 FBXO11Q86XK2 927 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ATG16L2Q8NAA4 619 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 HIST1H2AHQ96KK5 128 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 HIST1H2AJQ99878 128 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 H2AFJQ9BTM1 129 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 TMCO1Q9UM00 188 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 UBXN2AP68543 259 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 XRCC4Q13426 336 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 C1QTNF1Q9BXJ1 281 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 XKR8Q9H6D3 395 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 L1RE1Q9UN81 338 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 TSPAN19P0C672 248 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 CYP2D6P10635 497 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 FUT11Q495W5 492 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 CACHD1Q5VU97 1274 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 RNF26Q9BY78 433 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 FAM47E-STBD1D6RA91 191 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms