RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 NPTXRO95502 500 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 POU1F1P28069 291 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 AVPR1AP37288 418 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ROR1Q01973 937 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 SGCGQ13326 291 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 SCUBE1Q8IWY4 988 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 EFHD2Q96C19 240 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 SENP7Q9BQF6 1050 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 MMADHCQ9H3L0 296 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 KLHL3Q9UH77 587 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ZNF222Q9UK12 451 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 BTBD3Q9Y2F9 522 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 NR2E3Q9Y5X4 410 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 KCNQ2O43526 872 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ITGB6P18564 788 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 OVGP1Q12889 678 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 STARD3Q14849 445 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 C2CD2Q9Y426 696 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 LRRC14BA6NHZ5 514 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 TFE3P19532 575 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 CASP5P51878 434 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 RGS21Q2M5E4 152 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 NRSN1Q8IZ57 195 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 KLHL32Q96NJ5 620 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 PGLYRP2Q96PD5 576 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 RGL2O15211 777 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 PHGDHO43175 533 aaKnown RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 CNOT3O75175 753 aaKnown RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 TRADDQ15628 312 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 CROCCP3Q8IVE0 287 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 LINC00301Q8NCQ3 95 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ZNF564Q8TBZ8 553 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 COA1Q9GZY4 146 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 DNAJC12Q9UKB3 198 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 CUL7Q14999 1698 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 FAM58BPP0C7Q3 252 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 CCR4P51679 360 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 MTM1Q13496 603 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 TAB1Q15750 504 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 LRRC8DQ7L1W4 858 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 NECAB2Q7Z6G3 386 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SAPCD2Q86UD0 394 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 MNTQ99583 582 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 OMDQ99983 421 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 CHST12Q9NRB3 414 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PLA2G4CQ9UP65 541 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PEX1O43933 1283 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PLCG1P19174 1290 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 EPHX2P34913 555 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 ACOT2P49753 483 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 CDK17Q00537 523 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SLFN12LQ6IEE8 588 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 BTBD9Q96Q07 612 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 MANSC1Q9H8J5 431 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 METTL5Q9NRN9 209 aaKnown RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 EMC3Q9P0I2 261 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 CASTOR2A6NHX0 329 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 ZNF806P0C7X5 589 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 GAP43P17677 238 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SERPINB5P36952 375 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SULT1C3Q6IMI6 304 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 IGSF1Q8N6C5 1336 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PNMA6FA0A0J9YX94 578 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PSMA3P25788 255 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 HLFQ16534 295 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 DGKDQ16760 1214 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 GBA2Q9HCG7 927 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 ASNSD1Q9NWL6 643 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 CCDC182A6NF36 153 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 KCNN4O15554 427 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 GSTM1P09488 218 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PTGS2P35354 604 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SCARA3Q6AZY7 606 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PRUNE1Q86TP1 453 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 SETD3Q86TU7 594 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 ANKRD7Q92527 254 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 HEY2Q9UBP5 337 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 RALGAPBQ86X10 1494 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 GSTT1P30711 240 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 ARPC4P59998 168 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 GSTA3Q16772 222 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 PID1Q7Z2X4 250 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 LRRC34Q8IZ02 419 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 NSUN6Q8TEA1 469 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms