RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TPP2P29144 1249 aaPredicted RBP18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 AAGABQ6PD74 315 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 C3orf62Q6ZUJ4 267 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 WDR83Q9BRX9 315 aaKnown RBP18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 NDUFA13Q9P0J0 144 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 CNTN3Q9P232 1028 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 COQ4Q9Y3A0 265 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 ZNF536O15090 1300 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 MYH11P35749 1972 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 LRRC36Q1X8D7 754 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 MSS51Q4VC12 460 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 TAS1R2Q8TE23 839 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 CCDC127Q96BQ5 260 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 APOPT1Q96IL0 206 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 DEFB129Q9H1M3 183 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 PTTG2Q9NZH5 202 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 CIDEBQ9UHD4 219 aa18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 DRG1Q9Y295 367 aaKnown RBP18.48■□□□□ 0.55
CDKN1B-201ENST00000228872 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 PFDN1O60925 122 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 NSFP46459 744 aaKnown RBP18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 ITGA9Q13797 1035 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 ATP13A4Q4VNC1 1196 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 FNBP1LQ5T0N5 605 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 MON1BQ7L1V2 547 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 CBWD2Q8IUF1 395 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 LZICQ8WZA0 190 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 SERAC1Q96JX3 654 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 PCDH9Q9HC56 1237 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 RHBDL2Q9NX52 303 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 ZNF510Q9Y2H8 683 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 GAS7O60861 476 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 FAM163BP0C2L3 166 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 ATF7P17544 494 aaPredicted RBP18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 STIP1P31948 543 aaKnown RBP18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 RGS2P41220 211 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 ALCAMQ13740 583 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 RNF111Q6ZNA4 994 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 SHKBP1Q8TBC3 707 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 ACER1Q8TDN7 264 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 SLITRK1Q96PX8 696 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 TOPORSQ9NS56 1045 aaPredicted RBP18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 FARP1Q9Y4F1 1045 aaPredicted RBP18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 UTRNP46939 3433 aa18.47■□□□□ 0.55
CDKN1B-201ENST00000228872 NDC80O14777 642 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 KLF11O14901 512 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 CCDC166P0CW27 439 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 DESP17661 470 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 VCLP18206 1134 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 AQP4P55087 323 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 HPCAP84074 193 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 OASLQ15646 514 aaKnown RBP18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 LPCAT4Q643R3 524 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 PRPF39Q86UA1 669 aaKnown RBP18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 GSTCDQ8NEC7 633 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 PYDC1Q8WXC3 89 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 LXNQ9BS40 222 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 C17orf75Q9HAS0 396 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 TMEM8AQ9HCN3 771 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 SCAF8Q9UPN6 1271 aaKnown RBP18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 hCG_2014768A0A024R1R8 64 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 IFNB1P01574 187 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 DLG1Q12959 904 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 ANKRD22Q5VYY1 191 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 PADI6Q6TGC4 694 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 MFSD7Q6UXD7 560 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 HAUS1Q96CS2 278 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 DGCR14Q96DF8 476 aaKnown RBP18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 C11orf70Q9BRQ4 267 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 UNC45AQ9H3U1 944 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 RAB20Q9NX57 234 aa18.46■□□□□ 0.55
CDKN1B-201ENST00000228872 MAPTP10636 758 aaKnown RBP18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 STAT2P52630 851 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 SLC18A2Q05940 514 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 PDK3Q15120 406 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 TMEM259Q4ZIN3 620 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 RHPN2Q8IUC4 686 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 RCOR2Q8IZ40 523 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 FBXO36Q8NEA4 188 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 FBXL13Q8NEE6 735 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 DNAJC1Q96KC8 554 aaKnown RBP18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 TMEM121Q9BTD3 319 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 CCDC106Q9BWC9 280 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 KLHL4Q9C0H6 718 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 CHMP2BQ9UQN3 213 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 PPP2R3BQ9Y5P8 575 aa18.46■□□□□ 0.54
CDKN1B-201ENST00000228872 A0A088AWK7 358 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 SGK1O00141 431 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 KRT1P04264 644 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 SMIM18P0DKX4 95 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 CHN2P52757 468 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 PDE1BQ01064 536 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 SNRNP35Q16560 246 aaKnown RBP18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 LIN9Q5TKA1 542 aa18.45■□□□□ 0.54
CDKN1B-201ENST00000228872 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms