RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	URM1	P40554	99 aa	Predicted RBP	4.62	□□□□□ -1.67
RPN7	YPR108W	POP3	P53833	195 aa	Predicted RBP	4.62	□□□□□ -1.67
RPN7	YPR108W	PKR1	Q03880	122 aa	Known RBP	4.62	□□□□□ -1.67
RPN7	YPR108W	NAT5	Q08689	176 aa		4.62	□□□□□ -1.67
RPN7	YPR108W	SCS22	Q6Q595	175 aa		4.62	□□□□□ -1.67
RPN7	YPR108W	YBR182C-A	Q8TGU6	64 aa		4.62	□□□□□ -1.67
RPN7	YPR108W	DIF1	O13577	133 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	ANB1	P19211	157 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	FZF1	P32805	299 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	YKR070W	P36151	352 aa	Known RBP	4.61	□□□□□ -1.67
RPN7	YPR108W	MIC26	P50087	233 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	YGL230C	P53074	147 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	YGR017W	P53210	297 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	ATP23	P53722	227 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	YOL160W	Q08321	113 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	YLR363W-A	Q3E747	85 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	YOR008C-A	Q3E7B9	74 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	Q0297	Q9ZZV8	51 aa		4.61	□□□□□ -1.67
RPN7	YPR108W	PFY1	P07274	126 aa		4.6	□□□□□ -1.67
RPN7	YPR108W	KTI12	P34253	313 aa	Known RBP	4.6	□□□□□ -1.67
RPN7	YPR108W	LCB3	P47013	409 aa		4.6	□□□□□ -1.67
RPN7	YPR108W	TOS6	P48560	102 aa		4.6	□□□□□ -1.67
RPN7	YPR108W	YDL186W	P48568	277 aa		4.6	□□□□□ -1.67
RPN7	YPR108W	BET5	Q03630	159 aa		4.6	□□□□□ -1.67
RPN7	YPR108W	YPR014C	Q6B0W2	109 aa		4.6	□□□□□ -1.67
RPN7	YPR108W	PRY2	P36110	329 aa		4.59	□□□□□ -1.67
RPN7	YPR108W	SNU13	P39990	126 aa	Known RBP	4.59	□□□□□ -1.67
RPN7	YPR108W	YDR042C	Q03205	200 aa		4.59	□□□□□ -1.67
RPN7	YPR108W	IRC23	Q08416	157 aa		4.59	□□□□□ -1.67
RPN7	YPR108W	SAL1	D6W196	494 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	CCW14	O13547	238 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	ADH2	P00331	348 aa	Known RBP	4.58	□□□□□ -1.68
RPN7	YPR108W	Q0255	P03881	472 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	YBR090C	P38253	122 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	YER076C	P40049	302 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	YMR141C	P40211	102 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	MGR2	Q02889	113 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	TMA10	Q06177	86 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	YDL157C	Q12082	118 aa		4.58	□□□□□ -1.68
RPN7	YPR108W	MRPL23	Q12487	163 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN7	YPR108W	AGA1	P32323	725 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	UTR5	P32630	166 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	YBR144C	P34215	104 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	YHR022C	P38763	256 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	RPF1	P38805	295 aa	Known RBP	4.57	□□□□□ -1.68
RPN7	YPR108W	MPC2	P38857	129 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	GLO1	P50107	326 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	BRP1	P53194	125 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	VPS71	Q03433	280 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	YOR011W-A	Q3E807	68 aa		4.57	□□□□□ -1.68
RPN7	YPR108W	RPL2A	P0CX45	254 aa	Known RBP	4.56	□□□□□ -1.68
RPN7	YPR108W	RPL2B	P0CX46	254 aa	Known RBP	4.56	□□□□□ -1.68
RPN7	YPR108W	SEC11	P15367	167 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	YCL042W	P25572	119 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	YAR029W	P39549	74 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	MST28	P39552	234 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	YNL217W	P40152	326 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	YPL073C	P40323	161 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	PMP3	P87284	55 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	AIM34	Q03673	198 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	YMR103C	Q04436	120 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	FCF1	Q05498	189 aa	Predicted RBP	4.56	□□□□□ -1.68
RPN7	YPR108W	YGR035W-A	Q45U48	73 aa		4.56	□□□□□ -1.68
RPN7	YPR108W	CSF1	Q12150	2958 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	VAR1	P02381	398 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	RPL32	P38061	130 aa	Known RBP	4.55	□□□□□ -1.68
RPN7	YPR108W	ECM33	P38248	429 aa	Known RBP	4.55	□□□□□ -1.68
RPN7	YPR108W	SPI1	P40092	148 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	YNL200C	P40165	246 aa	Known RBP	4.55	□□□□□ -1.68
RPN7	YPR108W	HUA1	P40325	198 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	ELC1	Q03071	99 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	YMR181C	Q03231	154 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	MSC3	Q05812	728 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	PPT2	Q12036	173 aa		4.55	□□□□□ -1.68
RPN7	YPR108W	DCV1	P43595	202 aa		4.54	□□□□□ -1.68
RPN7	YPR108W	YJL028W	P47062	111 aa		4.54	□□□□□ -1.68
RPN7	YPR108W	MOT3	P54785	490 aa	Known RBP	4.54	□□□□□ -1.68
RPN7	YPR108W	ERI1	P62651	68 aa	Known RBP	4.54	□□□□□ -1.68
RPN7	YPR108W	MRPS8	Q03799	155 aa		4.54	□□□□□ -1.68
RPN7	YPR108W	TRP1	P00912	224 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	RPS11A	P0CX47	156 aa	Known RBP	4.53	□□□□□ -1.68
RPN7	YPR108W	RPS11B	P0CX48	156 aa	Known RBP	4.53	□□□□□ -1.68
RPN7	YPR108W	HMRA2	P0CY13	119 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	YER135C	P40082	130 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	YIL014C-A	Q02598	104 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	MHR1	Q06630	226 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	PRM7	Q12459	698 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	YBR200W-A	Q3E755	54 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	IGO2	Q9P305	131 aa		4.53	□□□□□ -1.68
RPN7	YPR108W	GCN1	P33892	2672 aa	Known RBP	4.52	□□□□□ -1.69
RPN7	YPR108W	GLE2	P40066	365 aa		4.52	□□□□□ -1.69
RPN7	YPR108W	YER181C	P40097	107 aa		4.52	□□□□□ -1.69
RPN7	YPR108W	PEX17	P40155	199 aa		4.52	□□□□□ -1.69
RPN7	YPR108W	YPL261C	Q08976	102 aa		4.52	□□□□□ -1.69
RPN7	YPR108W	YPR010C-A	A5Z2X5	72 aa		4.51	□□□□□ -1.69
RPN7	YPR108W	PAI3	P01094	68 aa		4.51	□□□□□ -1.69
RPN7	YPR108W	QCR8	P08525	94 aa		4.51	□□□□□ -1.69
RPN7	YPR108W	AQY1	P0CD91	305 aa		4.51	□□□□□ -1.69
RPN7	YPR108W	YKL070W	P36087	169 aa		4.51	□□□□□ -1.69
RPN7	YPR108W	CAX4	P53223	239 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms