RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C YGL118CP53132 145 aa6.3□□□□□ -1.4
SRP54YPR088C GRH1Q04410 372 aaKnown RBP6.3□□□□□ -1.4
SRP54YPR088C SEC72P39742 193 aaKnown RBP6.29□□□□□ -1.4
SRP54YPR088C SEN15Q04675 128 aa6.29□□□□□ -1.4
SRP54YPR088C YBR200W-AQ3E755 54 aa6.29□□□□□ -1.4
SRP54YPR088C COA6Q3E846 104 aa6.29□□□□□ -1.4
SRP54YPR088C DYN1P36022 4092 aa6.29□□□□□ -1.4
SRP54YPR088C YDR366CP87287 132 aa6.28□□□□□ -1.4
SRP54YPR088C Q0255P03881 472 aa6.28□□□□□ -1.4
SRP54YPR088C ELF1P36053 145 aa6.28□□□□□ -1.4
SRP54YPR088C YKR032WP36127 104 aa6.28□□□□□ -1.4
SRP54YPR088C YER134CP40081 178 aa6.28□□□□□ -1.4
SRP54YPR088C YFR035CP43608 114 aa6.28□□□□□ -1.4
SRP54YPR088C BRP1P53194 125 aa6.28□□□□□ -1.4
SRP54YPR088C RPL2AP0CX45 254 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C RPL2BP0CX46 254 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C RPS11AP0CX47 156 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C RPS11BP0CX48 156 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C GSP1P32835 219 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C GSP2P32836 220 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C TEM1P38987 245 aa6.27□□□□□ -1.41
SRP54YPR088C DUO1P53168 247 aaKnown RBP6.27□□□□□ -1.41
SRP54YPR088C VPS71Q03433 280 aa6.27□□□□□ -1.41
SRP54YPR088C YIL134C-AQ45U18 67 aa6.27□□□□□ -1.41
SRP54YPR088C RPL16BP26785 198 aaKnown RBP6.26□□□□□ -1.41
SRP54YPR088C MRPL11P36521 249 aaPredicted RBP6.26□□□□□ -1.41
SRP54YPR088C TVP18Q04767 167 aa6.26□□□□□ -1.41
SRP54YPR088C ERG27Q12452 347 aaKnown RBP6.26□□□□□ -1.41
SRP54YPR088C YPR053CQ6Q5F3 151 aa6.26□□□□□ -1.41
SRP54YPR088C PET8P38921 284 aa6.25□□□□□ -1.41
SRP54YPR088C YNL200CP40165 246 aaKnown RBP6.25□□□□□ -1.41
SRP54YPR088C CYC7P00045 113 aa6.25□□□□□ -1.41
SRP54YPR088C CDC40P40968 455 aaPredicted RBP6.25□□□□□ -1.41
SRP54YPR088C LSM8P47093 109 aaKnown RBP6.25□□□□□ -1.41
SRP54YPR088C AIM34Q03673 198 aa6.25□□□□□ -1.41
SRP54YPR088C KTI12P34253 313 aaKnown RBP6.24□□□□□ -1.41
SRP54YPR088C VHS2P40463 436 aa6.24□□□□□ -1.41
SRP54YPR088C YCH1P42937 148 aa6.24□□□□□ -1.41
SRP54YPR088C CGR1P53188 120 aa6.24□□□□□ -1.41
SRP54YPR088C COX12Q01519 83 aa6.24□□□□□ -1.41
SRP54YPR088C AIR2Q12476 344 aaKnown RBP6.24□□□□□ -1.41
SRP54YPR088C RPL42AP0CX27 106 aaKnown RBP6.23□□□□□ -1.41
SRP54YPR088C RPL42BP0CX28 106 aaKnown RBP6.23□□□□□ -1.41
SRP54YPR088C MLF3P32047 452 aa6.23□□□□□ -1.41
SRP54YPR088C RRT13P40042 185 aa6.23□□□□□ -1.41
SRP54YPR088C YIL014C-AQ02598 104 aa6.23□□□□□ -1.41
SRP54YPR088C MSC3Q05812 728 aa6.23□□□□□ -1.41
SRP54YPR088C YLR281CQ05863 155 aa6.23□□□□□ -1.41
SRP54YPR088C YJL028WP47062 111 aa6.22□□□□□ -1.41
SRP54YPR088C MGR2Q02889 113 aa6.22□□□□□ -1.41
SRP54YPR088C HTL1Q9URQ5 78 aa6.22□□□□□ -1.41
SRP54YPR088C PFY1P07274 126 aa6.21□□□□□ -1.41
SRP54YPR088C PAU16P35994 123 aa6.21□□□□□ -1.41
SRP54YPR088C YPR014CQ6B0W2 109 aa6.21□□□□□ -1.41
SRP54YPR088C SAL1D6W196 494 aa6.21□□□□□ -1.42
SRP54YPR088C YER076CP40049 302 aa6.21□□□□□ -1.42
SRP54YPR088C ATP23P53722 227 aa6.21□□□□□ -1.42
SRP54YPR088C YLR042CQ07990 161 aa6.21□□□□□ -1.42
SRP54YPR088C ERV14P53173 138 aa6.2□□□□□ -1.42
SRP54YPR088C POP3P53833 195 aaPredicted RBP6.2□□□□□ -1.42
SRP54YPR088C CNL1Q06333 122 aa6.2□□□□□ -1.42
SRP54YPR088C YLR122CQ12312 125 aa6.2□□□□□ -1.42
SRP54YPR088C YCR023CP25351 611 aa6.19□□□□□ -1.42
SRP54YPR088C YCR075W-AQ3E830 75 aa6.19□□□□□ -1.42
SRP54YPR088C YBR126W-AQ8TGU7 68 aa6.19□□□□□ -1.42
SRP54YPR088C YDR042CQ03205 200 aa6.18□□□□□ -1.42
SRP54YPR088C FCF1Q05498 189 aaPredicted RBP6.18□□□□□ -1.42
SRP54YPR088C DPP1Q05521 289 aa6.18□□□□□ -1.42
SRP54YPR088C AQY1P0CD91 305 aa6.17□□□□□ -1.42
SRP54YPR088C PRE1P22141 198 aaKnown RBP6.17□□□□□ -1.42
SRP54YPR088C DCV1P43595 202 aa6.17□□□□□ -1.42
SRP54YPR088C TOS6P48560 102 aa6.17□□□□□ -1.42
SRP54YPR088C GLO1P50107 326 aa6.17□□□□□ -1.42
SRP54YPR088C YPS5P53057 165 aa6.17□□□□□ -1.42
SRP54YPR088C FUN14P18411 198 aa6.17□□□□□ -1.42
SRP54YPR088C YKR070WP36151 352 aaKnown RBP6.17□□□□□ -1.42
SRP54YPR088C NRG2P38082 220 aa6.17□□□□□ -1.42
SRP54YPR088C TPT1Q12272 230 aaKnown RBP6.17□□□□□ -1.42
SRP54YPR088C RPL27BP0C2H7 136 aaKnown RBP6.16□□□□□ -1.42
SRP54YPR088C YCR001WP25347 104 aa6.16□□□□□ -1.42
SRP54YPR088C PCL2P25693 308 aa6.16□□□□□ -1.42
SRP54YPR088C VAM10Q08474 114 aa6.16□□□□□ -1.42
SRP54YPR088C YNL217WP40152 326 aa6.15□□□□□ -1.42
SRP54YPR088C DGA1Q08650 418 aa6.14□□□□□ -1.43
SRP54YPR088C YLR050CQ12155 161 aaKnown RBP6.14□□□□□ -1.43
SRP54YPR088C FYV7Q12247 151 aa6.14□□□□□ -1.43
SRP54YPR088C KRE9P39005 276 aa6.14□□□□□ -1.43
SRP54YPR088C HAC1P41546 238 aa6.14□□□□□ -1.43
SRP54YPR088C YGR240C-AQ3E786 66 aa6.14□□□□□ -1.43
SRP54YPR088C YOR008C-AQ3E7B9 74 aa6.14□□□□□ -1.43
SRP54YPR088C SCM4P32564 187 aa6.13□□□□□ -1.43
SRP54YPR088C SGF11Q03067 99 aa6.13□□□□□ -1.43
SRP54YPR088C MRPL44P19956 98 aa6.12□□□□□ -1.43
SRP54YPR088C APS1P35181 156 aa6.12□□□□□ -1.43
SRP54YPR088C FYV4P38783 130 aaPredicted RBP6.12□□□□□ -1.43
SRP54YPR088C PMP3P87284 55 aa6.12□□□□□ -1.43
SRP54YPR088C RDS3Q06835 107 aaPredicted RBP6.12□□□□□ -1.43
SRP54YPR088C YLR112WQ12130 139 aa6.12□□□□□ -1.43
SRP54YPR088C HMRA2P0CY13 119 aa6.11□□□□□ -1.43
SRP54YPR088C SEC11P15367 167 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 87.2 ms