RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W FMP49A0A023PZB3 126 aa7.22□□□□□ -1.25
MSF1YPR047W RPL11AP0C0W9 174 aaKnown RBP7.22□□□□□ -1.25
MSF1YPR047W RPL11BQ3E757 174 aaPredicted RBP7.22□□□□□ -1.25
MSF1YPR047W SOH1P38633 127 aa7.21□□□□□ -1.25
MSF1YPR047W ERV14P53173 138 aa7.21□□□□□ -1.25
MSF1YPR047W PBA1Q05778 276 aa7.21□□□□□ -1.25
MSF1YPR047W TIM22Q12328 207 aa7.21□□□□□ -1.25
MSF1YPR047W COA6Q3E846 104 aa7.21□□□□□ -1.25
MSF1YPR047W DIA1P54005 336 aa7.2□□□□□ -1.26
MSF1YPR047W UPS3Q04006 179 aa7.2□□□□□ -1.26
MSF1YPR047W YPR053CQ6Q5F3 151 aa7.2□□□□□ -1.26
MSF1YPR047W RPL12AP0CX53 165 aaKnown RBP7.19□□□□□ -1.26
MSF1YPR047W RPL12BP0CX54 165 aa7.19□□□□□ -1.26
MSF1YPR047W SRP21P32342 167 aa7.19□□□□□ -1.26
MSF1YPR047W YFR045WP43617 309 aa7.19□□□□□ -1.26
MSF1YPR047W HIT1P46973 164 aa7.19□□□□□ -1.26
MSF1YPR047W ATP19P81451 68 aa7.19□□□□□ -1.26
MSF1YPR047W YOR105WQ08504 108 aa7.19□□□□□ -1.26
MSF1YPR047W YLL066W-BQ8TGJ7 56 aa7.19□□□□□ -1.26
MSF1YPR047W SAL1D6W196 494 aa7.18□□□□□ -1.26
MSF1YPR047W LCL2Q08045 131 aa7.18□□□□□ -1.26
MSF1YPR047W DCN1Q12395 269 aa7.18□□□□□ -1.26
MSF1YPR047W FZF1P32805 299 aa7.18□□□□□ -1.26
MSF1YPR047W YPT53P36019 220 aa7.18□□□□□ -1.26
MSF1YPR047W CDC40P40968 455 aaPredicted RBP7.18□□□□□ -1.26
MSF1YPR047W YJL028WP47062 111 aa7.18□□□□□ -1.26
MSF1YPR047W YGR149WP48236 432 aa7.18□□□□□ -1.26
MSF1YPR047W NAT3Q06504 195 aa7.18□□□□□ -1.26
MSF1YPR047W YGL010WP25338 174 aa7.17□□□□□ -1.26
MSF1YPR047W YBR090CP38253 122 aa7.17□□□□□ -1.26
MSF1YPR047W SEN15Q04675 128 aa7.17□□□□□ -1.26
MSF1YPR047W YLR042CQ07990 161 aa7.17□□□□□ -1.26
MSF1YPR047W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
MSF1YPR047W SMT3Q12306 101 aaKnown RBP7.17□□□□□ -1.26
MSF1YPR047W YNR034W-AQ3E841 98 aa7.17□□□□□ -1.26
MSF1YPR047W RTC6O14464 93 aa7.16□□□□□ -1.26
MSF1YPR047W SCM4P32564 187 aa7.16□□□□□ -1.26
MSF1YPR047W KTI12P34253 313 aaKnown RBP7.16□□□□□ -1.26
MSF1YPR047W SRP14P38985 146 aa7.16□□□□□ -1.26
MSF1YPR047W YDL183CP48569 320 aa7.16□□□□□ -1.26
MSF1YPR047W DPP1Q05521 289 aa7.16□□□□□ -1.26
MSF1YPR047W DGA1Q08650 418 aa7.16□□□□□ -1.26
MSF1YPR047W YCR023CP25351 611 aa7.15□□□□□ -1.27
MSF1YPR047W OST3P48439 350 aa7.15□□□□□ -1.27
MSF1YPR047W TIR1P10863 254 aa7.14□□□□□ -1.27
MSF1YPR047W POR1P04840 283 aaKnown RBP7.13□□□□□ -1.27
MSF1YPR047W MRPL44P19956 98 aa7.13□□□□□ -1.27
MSF1YPR047W YIL134C-AQ45U18 67 aa7.13□□□□□ -1.27
MSF1YPR047W DAD2P36162 133 aa7.12□□□□□ -1.27
MSF1YPR047W RPB11P38902 120 aa7.12□□□□□ -1.27
MSF1YPR047W ATG33Q06485 197 aa7.12□□□□□ -1.27
MSF1YPR047W RPL33AP05744 107 aaKnown RBP7.11□□□□□ -1.27
MSF1YPR047W HMRA1P0CY11 126 aa7.11□□□□□ -1.27
MSF1YPR047W CUP2P15315 225 aa7.11□□□□□ -1.27
MSF1YPR047W MRPL11P36521 249 aaPredicted RBP7.11□□□□□ -1.27
MSF1YPR047W RPL33BP41056 107 aaKnown RBP7.11□□□□□ -1.27
MSF1YPR047W QRI5P32344 111 aa7.1□□□□□ -1.27
MSF1YPR047W ERI1P62651 68 aaKnown RBP7.1□□□□□ -1.27
MSF1YPR047W RPS22BQ3E7Y3 130 aaKnown RBP7.1□□□□□ -1.27
MSF1YPR047W YPL229WQ99395 206 aa7.1□□□□□ -1.27
MSF1YPR047W FUN14P18411 198 aa7.1□□□□□ -1.27
MSF1YPR047W SVP26P38869 228 aa7.1□□□□□ -1.27
MSF1YPR047W TEM1P38987 245 aa7.1□□□□□ -1.27
MSF1YPR047W YGR017WP53210 297 aa7.1□□□□□ -1.27
MSF1YPR047W ERG27Q12452 347 aaKnown RBP7.1□□□□□ -1.27
MSF1YPR047W MRPL31P14063 131 aaPredicted RBP7.09□□□□□ -1.28
MSF1YPR047W MIX23P38162 196 aa7.08□□□□□ -1.28
MSF1YPR047W PMP3P87284 55 aa7.08□□□□□ -1.28
MSF1YPR047W CSM4Q08955 156 aa7.08□□□□□ -1.28
MSF1YPR047W RRT15Q3E811 62 aa7.08□□□□□ -1.28
MSF1YPR047W YCL001W-BQ96VH2 84 aa7.08□□□□□ -1.28
MSF1YPR047W DIF1O13577 133 aa7.07□□□□□ -1.28
MSF1YPR047W YHR140WP38842 239 aa7.07□□□□□ -1.28
MSF1YPR047W GIM5Q04493 163 aa7.07□□□□□ -1.28
MSF1YPR047W MET32Q12041 191 aa7.07□□□□□ -1.28
MSF1YPR047W FYV7Q12247 151 aa7.07□□□□□ -1.28
MSF1YPR047W UBC5P15732 148 aa7.06□□□□□ -1.28
MSF1YPR047W PAM17P36147 197 aa7.05□□□□□ -1.28
MSF1YPR047W YDR115WQ04598 105 aa7.05□□□□□ -1.28
MSF1YPR047W YCR024C-BQ3E7Z8 88 aa7.05□□□□□ -1.28
MSF1YPR047W YMR122W-AQ3E842 84 aa7.05□□□□□ -1.28
MSF1YPR047W YPR010C-AA5Z2X5 72 aa7.04□□□□□ -1.28
MSF1YPR047W GPI19Q04082 140 aa7.04□□□□□ -1.28
MSF1YPR047W ATP5P09457 212 aa7.03□□□□□ -1.28
MSF1YPR047W RPL27AP0C2H6 136 aaKnown RBP7.03□□□□□ -1.28
MSF1YPR047W FCF1Q05498 189 aaPredicted RBP7.03□□□□□ -1.28
MSF1YPR047W YDL085C-AQ3E7B7 68 aaKnown RBP7.03□□□□□ -1.28
MSF1YPR047W MRP10O75012 95 aa7.02□□□□□ -1.29
MSF1YPR047W YDR034C-AP0C289 58 aa7.02□□□□□ -1.29
MSF1YPR047W PAU16P35994 123 aa7.02□□□□□ -1.29
MSF1YPR047W THG1P53215 237 aaKnown RBP7.02□□□□□ -1.29
MSF1YPR047W TVP18Q04767 167 aa7.02□□□□□ -1.29
MSF1YPR047W YMR320WQ04897 101 aa7.01□□□□□ -1.29
MSF1YPR047W POM33Q12164 279 aa7.01□□□□□ -1.29
MSF1YPR047W ZRT1P32804 376 aa7.01□□□□□ -1.29
MSF1YPR047W ARC15P40518 154 aaRIP-Chip data7.01□□□□□ -1.29not detected
MSF1YPR047W CNL1Q06333 122 aa7.01□□□□□ -1.29
MSF1YPR047W YER134CP40081 178 aa7□□□□□ -1.29
MSF1YPR047W YGL118CP53132 145 aa7□□□□□ -1.29
MSF1YPR047W ARC18Q05933 178 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 167.8 ms