RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W YGL118CP53132 145 aa6.24□□□□□ -1.41
YPT11YNL304W TVP18Q04767 167 aa6.24□□□□□ -1.41
YPT11YNL304W YLR281CQ05863 155 aa6.24□□□□□ -1.41
YPT11YNL304W DXO1Q06349 442 aa6.24□□□□□ -1.41
YPT11YNL304W MED7Q08278 222 aa6.24□□□□□ -1.41
YPT11YNL304W FSF1Q12029 327 aaKnown RBP6.24□□□□□ -1.41
YPT11YNL304W YCR075W-AQ3E830 75 aa6.24□□□□□ -1.41
YPT11YNL304W SEC4P07560 215 aaKnown RBP6.23□□□□□ -1.41
YPT11YNL304W COX12Q01519 83 aa6.23□□□□□ -1.41
YPT11YNL304W CUE4Q04201 117 aaPredicted RBP6.22□□□□□ -1.41
YPT11YNL304W YBR200W-AQ3E755 54 aa6.22□□□□□ -1.41
YPT11YNL304W YBR126W-AQ8TGU7 68 aa6.22□□□□□ -1.41
YPT11YNL304W CYC7P00045 113 aa6.21□□□□□ -1.42
YPT11YNL304W MLF3P32047 452 aa6.21□□□□□ -1.42
YPT11YNL304W YCH1P42937 148 aa6.21□□□□□ -1.42
YPT11YNL304W DUO1P53168 247 aaKnown RBP6.21□□□□□ -1.42
YPT11YNL304W VPS71Q03433 280 aa6.21□□□□□ -1.42
YPT11YNL304W YPR053CQ6Q5F3 151 aa6.21□□□□□ -1.42
YPT11YNL304W RPL16BP26785 198 aaKnown RBP6.2□□□□□ -1.42
YPT11YNL304W BRP1P53194 125 aa6.2□□□□□ -1.42
YPT11YNL304W AIM34Q03673 198 aa6.2□□□□□ -1.42
YPT11YNL304W COA6Q3E846 104 aa6.2□□□□□ -1.42
YPT11YNL304W RPL42AP0CX27 106 aaKnown RBP6.19□□□□□ -1.42
YPT11YNL304W RPL42BP0CX28 106 aaKnown RBP6.19□□□□□ -1.42
YPT11YNL304W MRPL11P36521 249 aaPredicted RBP6.19□□□□□ -1.42
YPT11YNL304W HTL1Q9URQ5 78 aa6.19□□□□□ -1.42
YPT11YNL304W KTI12P34253 313 aaKnown RBP6.18□□□□□ -1.42
YPT11YNL304W TEM1P38987 245 aa6.18□□□□□ -1.42
YPT11YNL304W VHS2P40463 436 aa6.18□□□□□ -1.42
YPT11YNL304W CGR1P53188 120 aa6.18□□□□□ -1.42
YPT11YNL304W SDH8P38345 138 aa6.17□□□□□ -1.42
YPT11YNL304W YFR035CP43608 114 aa6.17□□□□□ -1.42
YPT11YNL304W YKR032WP36127 104 aa6.16□□□□□ -1.42
YPT11YNL304W RRT13P40042 185 aa6.16□□□□□ -1.42
YPT11YNL304W YER134CP40081 178 aa6.16□□□□□ -1.42
YPT11YNL304W OST3P48439 350 aa6.16□□□□□ -1.42
YPT11YNL304W YLR042CQ07990 161 aa6.16□□□□□ -1.42
YPT11YNL304W YPR014CQ6B0W2 109 aa6.16□□□□□ -1.42
YPT11YNL304W SAL1D6W196 494 aa6.15□□□□□ -1.42
YPT11YNL304W YCR023CP25351 611 aa6.15□□□□□ -1.42
YPT11YNL304W GSP1P32835 219 aaKnown RBP6.15□□□□□ -1.42
YPT11YNL304W GSP2P32836 220 aaKnown RBP6.15□□□□□ -1.42
YPT11YNL304W YPS5P53057 165 aa6.15□□□□□ -1.42
YPT11YNL304W ERV14P53173 138 aa6.15□□□□□ -1.42
YPT11YNL304W ATP23P53722 227 aa6.15□□□□□ -1.42
YPT11YNL304W SGF11Q03067 99 aa6.15□□□□□ -1.42
YPT11YNL304W YIL134C-AQ45U18 67 aa6.15□□□□□ -1.42
YPT11YNL304W YCR001WP25347 104 aa6.14□□□□□ -1.43
YPT11YNL304W YER076CP40049 302 aa6.14□□□□□ -1.43
YPT11YNL304W YNL200CP40165 246 aaKnown RBP6.14□□□□□ -1.43
YPT11YNL304W SEN15Q04675 128 aa6.14□□□□□ -1.43
YPT11YNL304W PFY1P07274 126 aa6.13□□□□□ -1.43
YPT11YNL304W PET8P38921 284 aa6.13□□□□□ -1.43
YPT11YNL304W YNL217WP40152 326 aa6.13□□□□□ -1.43
YPT11YNL304W DCV1P43595 202 aa6.13□□□□□ -1.43
YPT11YNL304W CNL1Q06333 122 aa6.13□□□□□ -1.43
YPT11YNL304W VAM10Q08474 114 aa6.13□□□□□ -1.43
YPT11YNL304W ERG27Q12452 347 aaKnown RBP6.13□□□□□ -1.43
YPT11YNL304W DYN1P36022 4092 aa6.12□□□□□ -1.43
YPT11YNL304W YKR070WP36151 352 aaKnown RBP6.12□□□□□ -1.43
YPT11YNL304W NRG2P38082 220 aa6.12□□□□□ -1.43
YPT11YNL304W LSM8P47093 109 aaKnown RBP6.12□□□□□ -1.43
YPT11YNL304W GLO1P50107 326 aa6.12□□□□□ -1.43
YPT11YNL304W PMP3P87284 55 aa6.12□□□□□ -1.43
YPT11YNL304W YIL014C-AQ02598 104 aa6.12□□□□□ -1.43
YPT11YNL304W DGA1Q08650 418 aa6.12□□□□□ -1.43
YPT11YNL304W YGR240C-AQ3E786 66 aa6.12□□□□□ -1.43
YPT11YNL304W MGR2Q02889 113 aa6.11□□□□□ -1.43
YPT11YNL304W PCL2P25693 308 aa6.1□□□□□ -1.43
YPT11YNL304W PAU16P35994 123 aa6.1□□□□□ -1.43
YPT11YNL304W CDC40P40968 455 aaPredicted RBP6.1□□□□□ -1.43
YPT11YNL304W POP3P53833 195 aaPredicted RBP6.1□□□□□ -1.43
YPT11YNL304W DPP1Q05521 289 aa6.1□□□□□ -1.43
YPT11YNL304W RPS8AP0CX39 200 aaKnown RBP6.09□□□□□ -1.43
YPT11YNL304W RPS8BP0CX40 200 aaKnown RBP6.09□□□□□ -1.43
YPT11YNL304W TOS6P48560 102 aa6.09□□□□□ -1.43
YPT11YNL304W HAL1Q01766 294 aa6.09□□□□□ -1.43
YPT11YNL304W YOR008C-AQ3E7B9 74 aa6.09□□□□□ -1.43
YPT11YNL304W RPL27BP0C2H7 136 aaKnown RBP6.08□□□□□ -1.44
YPT11YNL304W AQY1P0CD91 305 aa6.08□□□□□ -1.44
YPT11YNL304W APS1P35181 156 aa6.08□□□□□ -1.44
YPT11YNL304W URM1P40554 99 aaPredicted RBP6.08□□□□□ -1.44
YPT11YNL304W PKR1Q03880 122 aaKnown RBP6.08□□□□□ -1.44
YPT11YNL304W SCW10Q04951 389 aa6.08□□□□□ -1.44
YPT11YNL304W FCF1Q05498 189 aaPredicted RBP6.08□□□□□ -1.44
YPT11YNL304W PRE1P22141 198 aaKnown RBP6.07□□□□□ -1.44
YPT11YNL304W YPT53P36019 220 aa6.07□□□□□ -1.44
YPT11YNL304W YRA2P36036 203 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
YPT11YNL304W KRE9P39005 276 aa6.07□□□□□ -1.44
YPT11YNL304W YJL028WP47062 111 aa6.07□□□□□ -1.44
YPT11YNL304W RDS3Q06835 107 aaPredicted RBP6.07□□□□□ -1.44
YPT11YNL304W YLR050CQ12155 161 aaKnown RBP6.07□□□□□ -1.44
YPT11YNL304W HMRA2P0CY13 119 aa6.06□□□□□ -1.44
YPT11YNL304W FUN14P18411 198 aa6.06□□□□□ -1.44
YPT11YNL304W ERI1P62651 68 aaKnown RBP6.06□□□□□ -1.44
YPT11YNL304W YDR042CQ03205 200 aa6.06□□□□□ -1.44
YPT11YNL304W CRC1Q12289 327 aa6.06□□□□□ -1.44
YPT11YNL304W ADH2P00331 348 aaKnown RBP6.05□□□□□ -1.44
YPT11YNL304W YBR209WP38311 105 aa6.05□□□□□ -1.44
YPT11YNL304W AUA1P32450 94 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms