RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YIL102C-AQ2V2P5 75 aa3.03□□□□□ -1.92
ECM16YMR128W RPL12AP0CX53 165 aaKnown RBP3.03□□□□□ -1.92
ECM16YMR128W RPL12BP0CX54 165 aa3.03□□□□□ -1.92
ECM16YMR128W ANB1P19211 157 aa3.03□□□□□ -1.92
ECM16YMR128W MOH1P38191 138 aa3.03□□□□□ -1.92
ECM16YMR128W YFR057WP43625 151 aa3.03□□□□□ -1.92
ECM16YMR128W IMP2P46972 177 aa3.03□□□□□ -1.92
ECM16YMR128W MRX11Q03079 207 aa3.03□□□□□ -1.92
ECM16YMR128W YOR032W-AQ8TGS1 66 aa3.03□□□□□ -1.92
ECM16YMR128W PRS4P38063 326 aaPredicted RBP3.02□□□□□ -1.93
ECM16YMR128W YER085CP40058 173 aa3.02□□□□□ -1.93
ECM16YMR128W YIR021W-AQ3E739 70 aa3.02□□□□□ -1.93
ECM16YMR128W YCR075W-AQ3E830 75 aa3.02□□□□□ -1.93
ECM16YMR128W CYC3P06182 269 aa3.02□□□□□ -1.93
ECM16YMR128W PAU7P39545 55 aa3.02□□□□□ -1.93
ECM16YMR128W YDR042CQ03205 200 aa3.02□□□□□ -1.93
ECM16YMR128W YMR103CQ04436 120 aa3.02□□□□□ -1.93
ECM16YMR128W FCY1Q12178 158 aa3.02□□□□□ -1.93
ECM16YMR128W FPR2P32472 135 aa3.02□□□□□ -1.93
ECM16YMR128W YPT53P36019 220 aa3.02□□□□□ -1.93
ECM16YMR128W MBB1P39534 108 aa3.02□□□□□ -1.93
ECM16YMR128W YPL229WQ99395 206 aa3.02□□□□□ -1.93
ECM16YMR128W YOR304C-AO14468 76 aa3.01□□□□□ -1.93
ECM16YMR128W UGX2P32772 223 aa3.01□□□□□ -1.93
ECM16YMR128W TIR2P33890 251 aa3.01□□□□□ -1.93
ECM16YMR128W YNR077CP53758 84 aa3.01□□□□□ -1.93
ECM16YMR128W PRM3Q08931 133 aa3.01□□□□□ -1.93
ECM16YMR128W AQY1P0CD91 305 aa3.01□□□□□ -1.93
ECM16YMR128W GPI18P38211 433 aa3.01□□□□□ -1.93
ECM16YMR128W VTC1P40046 129 aaRIP-Chip data3.01□□□□□ -1.93not detected
ECM16YMR128W ISD11Q6Q560 94 aa3.01□□□□□ -1.93
ECM16YMR128W APS1P35181 156 aa3□□□□□ -1.93
ECM16YMR128W YLR112WQ12130 139 aa3□□□□□ -1.93
ECM16YMR128W DAD1Q12248 94 aa3□□□□□ -1.93
ECM16YMR128W DAL82P21705 255 aa3□□□□□ -1.93
ECM16YMR128W ADH5P38113 351 aaKnown RBP3□□□□□ -1.93
ECM16YMR128W MST28P39552 234 aa3□□□□□ -1.93
ECM16YMR128W YJL027CP47063 138 aaPredicted RBP3□□□□□ -1.93
ECM16YMR128W RPL27BP0C2H7 136 aaKnown RBP3□□□□□ -1.93
ECM16YMR128W NCA3P46955 337 aa3□□□□□ -1.93
ECM16YMR128W RPS28BP0C0X0 67 aaKnown RBP2.99□□□□□ -1.93
ECM16YMR128W YPL073CP40323 161 aa2.99□□□□□ -1.93
ECM16YMR128W YLR296WQ05898 108 aa2.99□□□□□ -1.93
ECM16YMR128W RPS28AQ3E7X9 67 aaPredicted RBP2.99□□□□□ -1.93
ECM16YMR128W YER175W-AQ8TGU4 54 aa2.99□□□□□ -1.93
ECM16YMR128W YBR126W-AQ8TGU7 68 aa2.99□□□□□ -1.93
ECM16YMR128W ATP23P53722 227 aa2.99□□□□□ -1.93
ECM16YMR128W PHO85P17157 305 aa2.99□□□□□ -1.93
ECM16YMR128W SUR7P54003 302 aa2.99□□□□□ -1.93
ECM16YMR128W SED1Q01589 338 aa2.99□□□□□ -1.93
ECM16YMR128W RPL27AP0C2H6 136 aaKnown RBP2.98□□□□□ -1.93
ECM16YMR128W AGA1P32323 725 aa2.98□□□□□ -1.93
ECM16YMR128W YKL044WP36092 106 aa2.98□□□□□ -1.93
ECM16YMR128W ERG28P40030 148 aa2.98□□□□□ -1.93
ECM16YMR128W LCB3P47013 409 aa2.98□□□□□ -1.93
ECM16YMR128W MST27P53176 234 aa2.98□□□□□ -1.93
ECM16YMR128W HMRA2P0CY13 119 aa2.98□□□□□ -1.93
ECM16YMR128W OXA1P39952 402 aa2.98□□□□□ -1.93
ECM16YMR128W MGR2Q02889 113 aa2.98□□□□□ -1.93
ECM16YMR128W ELC1Q03071 99 aa2.98□□□□□ -1.93
ECM16YMR128W MID2P36027 376 aa2.98□□□□□ -1.93
ECM16YMR128W YKR041WP36134 250 aa2.98□□□□□ -1.93
ECM16YMR128W YOL160WQ08321 113 aa2.98□□□□□ -1.93
ECM16YMR128W PRM7Q12459 698 aa2.98□□□□□ -1.93
ECM16YMR128W HTL1Q9URQ5 78 aa2.98□□□□□ -1.93
ECM16YMR128W VHS2P40463 436 aa2.97□□□□□ -1.93
ECM16YMR128W OST2P46964 130 aa2.97□□□□□ -1.93
ECM16YMR128W YML079WQ03629 201 aa2.97□□□□□ -1.93
ECM16YMR128W JID1Q12350 301 aa2.97□□□□□ -1.93
ECM16YMR128W COA3Q3E7B2 85 aa2.97□□□□□ -1.93
ECM16YMR128W YOL085CQ99345 113 aa2.97□□□□□ -1.93
ECM16YMR128W RPS23AP0CX29 145 aaKnown RBP2.97□□□□□ -1.93
ECM16YMR128W RPS23BP0CX30 145 aa2.97□□□□□ -1.93
ECM16YMR128W INO4P13902 151 aa2.97□□□□□ -1.93
ECM16YMR128W GPI19Q04082 140 aa2.97□□□□□ -1.93
ECM16YMR128W FCF1Q05498 189 aaPredicted RBP2.97□□□□□ -1.93
ECM16YMR128W PBP4Q07362 185 aaKnown RBP2.97□□□□□ -1.93
ECM16YMR128W TEL1P38110 2787 aa2.97□□□□□ -1.93
ECM16YMR128W YER076CP40049 302 aa2.97□□□□□ -1.93
ECM16YMR128W YPL261CQ08976 102 aa2.97□□□□□ -1.93
ECM16YMR128W GCN1P33892 2672 aaKnown RBP2.96□□□□□ -1.93
ECM16YMR128W VAR1P02381 398 aa2.96□□□□□ -1.94
ECM16YMR128W YKL070WP36087 169 aa2.96□□□□□ -1.94
ECM16YMR128W YMR181CQ03231 154 aa2.96□□□□□ -1.94
ECM16YMR128W AIM34Q03673 198 aa2.96□□□□□ -1.94
ECM16YMR128W SDH7Q04401 133 aa2.96□□□□□ -1.94
ECM16YMR128W YKL023C-AQ2V2P3 75 aa2.96□□□□□ -1.94
ECM16YMR128W YCL048W-AQ2V2Q2 79 aa2.96□□□□□ -1.94
ECM16YMR128W TOR2P32600 2474 aaKnown RBP2.96□□□□□ -1.94
ECM16YMR128W YFL065CP43539 102 aa2.96□□□□□ -1.94
ECM16YMR128W YPR203WQ08994 102 aa2.96□□□□□ -1.94
ECM16YMR128W RRT1P38192 103 aa2.96□□□□□ -1.94
ECM16YMR128W YHR140WP38842 239 aa2.96□□□□□ -1.94
ECM16YMR128W YDL009CQ12210 107 aa2.95□□□□□ -1.94
ECM16YMR128W NHP2P32495 156 aaPredicted RBP2.95□□□□□ -1.94
ECM16YMR128W CMC1P36064 111 aa2.95□□□□□ -1.94
ECM16YMR128W UBC7Q02159 165 aa2.95□□□□□ -1.94
ECM16YMR128W YMR317WQ04893 1140 aa2.95□□□□□ -1.94
ECM16YMR128W TIM22Q12328 207 aa2.95□□□□□ -1.94
ECM16YMR128W PFY1P07274 126 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms