RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C HTL1Q9URQ5 78 aa7.03□□□□□ -1.28
SEC61YLR378C VAR1P02381 398 aa7.02□□□□□ -1.29
SEC61YLR378C FUN14P18411 198 aa7.02□□□□□ -1.29
SEC61YLR378C MSN1P22148 382 aa7.02□□□□□ -1.29
SEC61YLR378C YKL102CP34249 101 aa7.02□□□□□ -1.29
SEC61YLR378C ELF1P36053 145 aa7.02□□□□□ -1.29
SEC61YLR378C AGA1P32323 725 aa7.01□□□□□ -1.29
SEC61YLR378C PAU16P35994 123 aa7.01□□□□□ -1.29
SEC61YLR378C MIG3P39943 394 aa7.01□□□□□ -1.29
SEC61YLR378C CDC40P40968 455 aaPredicted RBP7.01□□□□□ -1.29
SEC61YLR378C MRPS8Q03799 155 aa7.01□□□□□ -1.29
SEC61YLR378C CNL1Q06333 122 aa7.01□□□□□ -1.29
SEC61YLR378C YOL085CQ99345 113 aa7.01□□□□□ -1.29
SEC61YLR378C Q0255P03881 472 aa7.01□□□□□ -1.29
SEC61YLR378C MIC26P50087 233 aa7.01□□□□□ -1.29
SEC61YLR378C BRP1P53194 125 aa7.01□□□□□ -1.29
SEC61YLR378C TVP18Q04767 167 aa7.01□□□□□ -1.29
SEC61YLR378C YNL200CP40165 246 aaKnown RBP7□□□□□ -1.29
SEC61YLR378C NUM1Q00402 2748 aa7□□□□□ -1.29
SEC61YLR378C MRPL44P19956 98 aa6.99□□□□□ -1.29
SEC61YLR378C AGE2P40529 298 aa6.99□□□□□ -1.29
SEC61YLR378C YJL028WP47062 111 aa6.99□□□□□ -1.29
SEC61YLR378C YDR366CP87287 132 aa6.99□□□□□ -1.29
SEC61YLR378C LSO2Q3E772 92 aaKnown RBP6.99□□□□□ -1.29
SEC61YLR378C YKR032WP36127 104 aa6.98□□□□□ -1.29
SEC61YLR378C FYV7Q12247 151 aa6.98□□□□□ -1.29
SEC61YLR378C YBR200W-AQ3E755 54 aa6.98□□□□□ -1.29
SEC61YLR378C YPR014CQ6B0W2 109 aa6.98□□□□□ -1.29
SEC61YLR378C RPL42AP0CX27 106 aaKnown RBP6.97□□□□□ -1.29
SEC61YLR378C RPL42BP0CX28 106 aaKnown RBP6.97□□□□□ -1.29
SEC61YLR378C DUT1P33317 147 aa6.97□□□□□ -1.29
SEC61YLR378C YPR053CQ6Q5F3 151 aa6.97□□□□□ -1.29
SEC61YLR378C KTI12P34253 313 aaKnown RBP6.96□□□□□ -1.3
SEC61YLR378C PET8P38921 284 aa6.96□□□□□ -1.3
SEC61YLR378C YER076CP40049 302 aa6.96□□□□□ -1.3
SEC61YLR378C DUO1P53168 247 aaKnown RBP6.96□□□□□ -1.3
SEC61YLR378C ATP23P53722 227 aa6.96□□□□□ -1.3
SEC61YLR378C POP3P53833 195 aaPredicted RBP6.96□□□□□ -1.3
SEC61YLR378C YIL014C-AQ02598 104 aa6.96□□□□□ -1.3
SEC61YLR378C TPT1Q12272 230 aaKnown RBP6.96□□□□□ -1.3
SEC61YLR378C SAL1D6W196 494 aa6.95□□□□□ -1.3
SEC61YLR378C YCR023CP25351 611 aa6.95□□□□□ -1.3
SEC61YLR378C SCM4P32564 187 aa6.95□□□□□ -1.3
SEC61YLR378C YDR274CP87283 123 aa6.95□□□□□ -1.3
SEC61YLR378C DPP1Q05521 289 aa6.95□□□□□ -1.3
SEC61YLR378C PFY1P07274 126 aa6.94□□□□□ -1.3
SEC61YLR378C RPL2AP0CX45 254 aaKnown RBP6.94□□□□□ -1.3
SEC61YLR378C RPL2BP0CX46 254 aaKnown RBP6.94□□□□□ -1.3
SEC61YLR378C RPS11AP0CX47 156 aaKnown RBP6.94□□□□□ -1.3
SEC61YLR378C RPS11BP0CX48 156 aaKnown RBP6.94□□□□□ -1.3
SEC61YLR378C RPL16BP26785 198 aaKnown RBP6.94□□□□□ -1.3
SEC61YLR378C MIG1P27705 504 aa6.94□□□□□ -1.3
SEC61YLR378C MGR2Q02889 113 aa6.94□□□□□ -1.3
SEC61YLR378C GRH1Q04410 372 aaKnown RBP6.94□□□□□ -1.3
SEC61YLR378C YKL069WP36088 180 aa6.93□□□□□ -1.3
SEC61YLR378C HAC1P41546 238 aa6.93□□□□□ -1.3
SEC61YLR378C AIM34Q03673 198 aa6.93□□□□□ -1.3
SEC61YLR378C YLR050CQ12155 161 aaKnown RBP6.93□□□□□ -1.3
SEC61YLR378C ATP5P09457 212 aa6.93□□□□□ -1.3
SEC61YLR378C RPL27BP0C2H7 136 aaKnown RBP6.93□□□□□ -1.3
SEC61YLR378C YCH1P42937 148 aa6.93□□□□□ -1.3
SEC61YLR378C MLF3P32047 452 aa6.92□□□□□ -1.3
SEC61YLR378C GLO1P50107 326 aa6.92□□□□□ -1.3
SEC61YLR378C YDR042CQ03205 200 aa6.92□□□□□ -1.3
SEC61YLR378C MSC3Q05812 728 aa6.92□□□□□ -1.3
SEC61YLR378C YCR007CP25354 239 aa6.91□□□□□ -1.3
SEC61YLR378C PCL2P25693 308 aa6.91□□□□□ -1.3
SEC61YLR378C APS1P35181 156 aa6.91□□□□□ -1.3
SEC61YLR378C VHS2P40463 436 aa6.91□□□□□ -1.3
SEC61YLR378C SAE3P89114 91 aa6.91□□□□□ -1.3
SEC61YLR378C PKR1Q03880 122 aaKnown RBP6.91□□□□□ -1.3
SEC61YLR378C FCF1Q05498 189 aaPredicted RBP6.91□□□□□ -1.3
SEC61YLR378C AQY1P0CD91 305 aa6.9□□□□□ -1.31
SEC61YLR378C PRE1P22141 198 aaKnown RBP6.9□□□□□ -1.31
SEC61YLR378C YKR070WP36151 352 aaKnown RBP6.9□□□□□ -1.31
SEC61YLR378C RRT13P40042 185 aa6.9□□□□□ -1.31
SEC61YLR378C TOS6P48560 102 aa6.9□□□□□ -1.31
SEC61YLR378C NAT5Q08689 176 aa6.9□□□□□ -1.31
SEC61YLR378C YDL085C-AQ3E7B7 68 aaKnown RBP6.9□□□□□ -1.31
SEC61YLR378C YCR075W-AQ3E830 75 aa6.9□□□□□ -1.31
SEC61YLR378C MSL1P40567 111 aaPredicted RBP6.89□□□□□ -1.31
SEC61YLR378C DCV1P43595 202 aa6.89□□□□□ -1.31
SEC61YLR378C YFR035CP43608 114 aa6.89□□□□□ -1.31
SEC61YLR378C YLR042CQ07990 161 aa6.89□□□□□ -1.31
SEC61YLR378C YBR126W-AQ8TGU7 68 aa6.89□□□□□ -1.31
SEC61YLR378C SEC11P15367 167 aa6.88□□□□□ -1.31
SEC61YLR378C FYV4P38783 130 aaPredicted RBP6.88□□□□□ -1.31
SEC61YLR378C YGL230CP53074 147 aa6.88□□□□□ -1.31
SEC61YLR378C YOR008C-AQ3E7B9 74 aa6.88□□□□□ -1.31
SEC61YLR378C CYC7P00045 113 aa6.87□□□□□ -1.31
SEC61YLR378C COX12Q01519 83 aa6.87□□□□□ -1.31
SEC61YLR378C YDL157CQ12082 118 aa6.87□□□□□ -1.31
SEC61YLR378C SCS22Q6Q595 175 aa6.87□□□□□ -1.31
SEC61YLR378C HMRA2P0CY13 119 aa6.85□□□□□ -1.31
SEC61YLR378C URM1P40554 99 aaPredicted RBP6.85□□□□□ -1.31
SEC61YLR378C VPS71Q03433 280 aa6.85□□□□□ -1.31
SEC61YLR378C AIR2Q12476 344 aaKnown RBP6.85□□□□□ -1.31
SEC61YLR378C BET5Q03630 159 aa6.84□□□□□ -1.31
SEC61YLR378C YMR103CQ04436 120 aa6.84□□□□□ -1.31
SEC61YLR378C YLR112WQ12130 139 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms