RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YPL264CQ08980 353 aa2.77□□□□□ -1.97
LCB5YLR260W ATG5Q12380 294 aa2.77□□□□□ -1.97
LCB5YLR260W TOM40P23644 387 aaKnown RBP2.76□□□□□ -1.97
LCB5YLR260W RPB9P27999 122 aa2.76□□□□□ -1.97
LCB5YLR260W LSM2P38203 95 aaKnown RBP2.76□□□□□ -1.97
LCB5YLR260W TEM1P38987 245 aa2.76□□□□□ -1.97
LCB5YLR260W SPC25P40014 221 aa2.76□□□□□ -1.97
LCB5YLR260W YNL200CP40165 246 aaKnown RBP2.76□□□□□ -1.97
LCB5YLR260W YMR252CQ04814 134 aa2.76□□□□□ -1.97
LCB5YLR260W YLR156WP0CE96 114 aa2.75□□□□□ -1.97
LCB5YLR260W YLR159WP0CE97 114 aa2.75□□□□□ -1.97
LCB5YLR260W YLR161WP0CE98 114 aa2.75□□□□□ -1.97
LCB5YLR260W FUN14P18411 198 aa2.75□□□□□ -1.97
LCB5YLR260W YFL067WP43537 175 aa2.75□□□□□ -1.97
LCB5YLR260W DAN1P47178 298 aa2.75□□□□□ -1.97
LCB5YLR260W SBH1P52870 82 aa2.75□□□□□ -1.97
LCB5YLR260W CRC1Q12289 327 aa2.75□□□□□ -1.97
LCB5YLR260W ATO3Q12359 275 aa2.75□□□□□ -1.97
LCB5YLR260W RPL13AQ12690 199 aaPredicted RBP2.75□□□□□ -1.97
LCB5YLR260W NOP1P15646 327 aaKnown RBP2.75□□□□□ -1.97
LCB5YLR260W ATP15P21306 62 aa2.75□□□□□ -1.97
LCB5YLR260W AHT1P29589 182 aa2.75□□□□□ -1.97
LCB5YLR260W RPB11P38902 120 aa2.75□□□□□ -1.97
LCB5YLR260W RIM9Q04734 239 aa2.75□□□□□ -1.97
LCB5YLR260W YOS1Q3E834 85 aa2.75□□□□□ -1.97
LCB5YLR260W YMR105W-AQ8TGS8 64 aa2.75□□□□□ -1.97
LCB5YLR260W MED11Q99278 115 aa2.75□□□□□ -1.97
LCB5YLR260W HMRA1P0CY11 126 aa2.74□□□□□ -1.97
LCB5YLR260W URA5P13298 226 aaKnown RBP2.74□□□□□ -1.97
LCB5YLR260W FMT1P32785 401 aa2.74□□□□□ -1.97
LCB5YLR260W SSS1P35179 80 aa2.74□□□□□ -1.97
LCB5YLR260W FYV4P38783 130 aaPredicted RBP2.74□□□□□ -1.97
LCB5YLR260W YIL059CP40520 121 aa2.74□□□□□ -1.97
LCB5YLR260W GON7P46984 123 aa2.74□□□□□ -1.97
LCB5YLR260W SNN1P48232 102 aa2.74□□□□□ -1.97
LCB5YLR260W RPL21AQ02753 160 aaKnown RBP2.74□□□□□ -1.97
LCB5YLR260W EST3Q03096 181 aa2.74□□□□□ -1.97
LCB5YLR260W YMR103CQ04436 120 aa2.74□□□□□ -1.97
LCB5YLR260W SDH4P37298 181 aa2.73□□□□□ -1.97
LCB5YLR260W HTD2P38790 280 aaKnown RBP2.73□□□□□ -1.97
LCB5YLR260W YND1P40009 630 aa2.73□□□□□ -1.97
LCB5YLR260W VTC1P40046 129 aaRIP-Chip data2.73□□□□□ -1.97not detected
LCB5YLR260W RPL13BP40212 199 aaKnown RBP2.73□□□□□ -1.97
LCB5YLR260W FYV12Q08559 129 aa2.73□□□□□ -1.97
LCB5YLR260W JID1Q12350 301 aa2.73□□□□□ -1.97
LCB5YLR260W HSP12P22943 109 aaKnown RBP2.73□□□□□ -1.97
LCB5YLR260W MRS4P23500 304 aa2.73□□□□□ -1.97
LCB5YLR260W SYS1P41544 203 aa2.73□□□□□ -1.97
LCB5YLR260W YDR115WQ04598 105 aa2.73□□□□□ -1.97
LCB5YLR260W YNL162W-AQ3E7A8 72 aa2.73□□□□□ -1.97
LCB5YLR260W AGA2P32781 87 aa2.72□□□□□ -1.97
LCB5YLR260W YAR029WP39549 74 aa2.72□□□□□ -1.97
LCB5YLR260W YER134CP40081 178 aa2.72□□□□□ -1.97
LCB5YLR260W GAT4P40569 121 aa2.72□□□□□ -1.97
LCB5YLR260W GEP7P53171 287 aa2.72□□□□□ -1.97
LCB5YLR260W PAU12P53343 120 aa2.72□□□□□ -1.97
LCB5YLR260W SMT3Q12306 101 aaKnown RBP2.72□□□□□ -1.97
LCB5YLR260W INO4P13902 151 aa2.72□□□□□ -1.97
LCB5YLR260W YAR068WP39564 161 aa2.72□□□□□ -1.97
LCB5YLR260W PHS1P40857 217 aa2.72□□□□□ -1.97
LCB5YLR260W PIR5P46999 287 aa2.72□□□□□ -1.97
LCB5YLR260W YNR064CP53750 290 aa2.72□□□□□ -1.97
LCB5YLR260W UPS1Q05776 175 aa2.72□□□□□ -1.97
LCB5YLR260W ADH3P07246 375 aaKnown RBP2.71□□□□□ -1.98
LCB5YLR260W HAP3P13434 144 aa2.71□□□□□ -1.98
LCB5YLR260W SFT2P38166 215 aa2.71□□□□□ -1.98
LCB5YLR260W GPI18P38211 433 aa2.71□□□□□ -1.98
LCB5YLR260W YGL118CP53132 145 aa2.71□□□□□ -1.98
LCB5YLR260W YAR023CD6VPM8 179 aa2.7□□□□□ -1.98
LCB5YLR260W COX9P07255 59 aa2.7□□□□□ -1.98
LCB5YLR260W PAM17P36147 197 aa2.7□□□□□ -1.98
LCB5YLR260W PAU24P38155 120 aa2.7□□□□□ -1.98
LCB5YLR260W ECM19Q06011 112 aa2.7□□□□□ -1.98
LCB5YLR260W PIN3Q06449 215 aa2.7□□□□□ -1.98
LCB5YLR260W ANT1Q06497 328 aa2.7□□□□□ -1.98
LCB5YLR260W MIG1P27705 504 aa2.7□□□□□ -1.98
LCB5YLR260W YFR045WP43617 309 aa2.7□□□□□ -1.98
LCB5YLR260W DDR48P18899 430 aaKnown RBP2.69□□□□□ -1.98
LCB5YLR260W ASP1P38986 381 aaPredicted RBP2.69□□□□□ -1.98
LCB5YLR260W CWP2P43497 92 aa2.69□□□□□ -1.98
LCB5YLR260W YFL065CP43539 102 aa2.69□□□□□ -1.98
LCB5YLR260W SCW4P53334 386 aaKnown RBP2.69□□□□□ -1.98
LCB5YLR260W YDR274CP87283 123 aa2.69□□□□□ -1.98
LCB5YLR260W SMD1Q02260 146 aaPredicted RBP2.69□□□□□ -1.98
LCB5YLR260W YMR082CQ04276 118 aa2.69□□□□□ -1.98
LCB5YLR260W SYM1Q06563 197 aa2.69□□□□□ -1.98
LCB5YLR260W IRC25Q07951 179 aa2.69□□□□□ -1.98
LCB5YLR260W YOL029CQ08187 201 aa2.69□□□□□ -1.98
LCB5YLR260W YOL118CQ08259 102 aa2.69□□□□□ -1.98
LCB5YLR260W YPR203WQ08994 102 aa2.69□□□□□ -1.98
LCB5YLR260W YDR029WQ12111 104 aa2.69□□□□□ -1.98
LCB5YLR260W DFM1Q12743 341 aaKnown RBP2.69□□□□□ -1.98
LCB5YLR260W YOR192C-CQ3E736 78 aa2.69□□□□□ -1.98
LCB5YLR260W PAU2P32612 120 aa2.69□□□□□ -1.98
LCB5YLR260W KEI1Q06346 221 aa2.69□□□□□ -1.98
LCB5YLR260W YOR376W-AQ3E805 51 aa2.69□□□□□ -1.98
LCB5YLR260W UMP1P38293 148 aa2.68□□□□□ -1.98
LCB5YLR260W YER078W-AQ3E7A2 54 aa2.68□□□□□ -1.98
LCB5YLR260W ODC2Q99297 307 aa2.68□□□□□ -1.98
LCB5YLR260W TMA19P35691 167 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms