RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C NRG2P38082 220 aa7.78□□□□□ -1.16
SHM2YLR058C YDR366CP87287 132 aa7.78□□□□□ -1.16
SHM2YLR058C TMA17Q12513 150 aa7.78□□□□□ -1.16
SHM2YLR058C CYC7P00045 113 aa7.78□□□□□ -1.16
SHM2YLR058C RPL16BP26785 198 aaKnown RBP7.78□□□□□ -1.16
SHM2YLR058C FRS1P15624 595 aaKnown RBP7.77□□□□□ -1.17
SHM2YLR058C MRPL28P36527 147 aa7.77□□□□□ -1.17
SHM2YLR058C VHS2P40463 436 aa7.77□□□□□ -1.17
SHM2YLR058C BRP1P53194 125 aa7.77□□□□□ -1.17
SHM2YLR058C YPR053CQ6Q5F3 151 aa7.77□□□□□ -1.17
SHM2YLR058C SDH8P38345 138 aa7.76□□□□□ -1.17
SHM2YLR058C WIP1Q2V2P8 89 aa7.76□□□□□ -1.17
SHM2YLR058C RRT13P40042 185 aa7.75□□□□□ -1.17
SHM2YLR058C DXO1Q06349 442 aa7.75□□□□□ -1.17
SHM2YLR058C AUA1P32450 94 aa7.74□□□□□ -1.17
SHM2YLR058C YKR032WP36127 104 aa7.74□□□□□ -1.17
SHM2YLR058C AIM34Q03673 198 aa7.74□□□□□ -1.17
SHM2YLR058C ELF1P36053 145 aa7.72□□□□□ -1.17
SHM2YLR058C PET8P38921 284 aa7.72□□□□□ -1.17
SHM2YLR058C YCR001WP25347 104 aa7.71□□□□□ -1.17
SHM2YLR058C YCH1P42937 148 aa7.71□□□□□ -1.17
SHM2YLR058C TVP18Q04767 167 aa7.71□□□□□ -1.17
SHM2YLR058C RDS3Q06835 107 aaPredicted RBP7.71□□□□□ -1.17
SHM2YLR058C SSS1P35179 80 aa7.7□□□□□ -1.18
SHM2YLR058C MED7Q08278 222 aa7.7□□□□□ -1.18
SHM2YLR058C SEC72P39742 193 aaKnown RBP7.69□□□□□ -1.18
SHM2YLR058C CUE4Q04201 117 aaPredicted RBP7.69□□□□□ -1.18
SHM2YLR058C SCW10Q04951 389 aa7.69□□□□□ -1.18
SHM2YLR058C YLR042CQ07990 161 aa7.69□□□□□ -1.18
SHM2YLR058C CMC2Q3E7A4 109 aa7.69□□□□□ -1.18
SHM2YLR058C KTI12P34253 313 aaKnown RBP7.69□□□□□ -1.18
SHM2YLR058C YRA2P36036 203 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
SHM2YLR058C YNL200CP40165 246 aaKnown RBP7.69□□□□□ -1.18
SHM2YLR058C YPS5P53057 165 aa7.69□□□□□ -1.18
SHM2YLR058C YGL118CP53132 145 aa7.69□□□□□ -1.18
SHM2YLR058C VAM10Q08474 114 aa7.69□□□□□ -1.18
SHM2YLR058C YCR075W-AQ3E830 75 aa7.69□□□□□ -1.18
SHM2YLR058C YCR023CP25351 611 aa7.68□□□□□ -1.18
SHM2YLR058C GSP1P32835 219 aaKnown RBP7.68□□□□□ -1.18
SHM2YLR058C GSP2P32836 220 aaKnown RBP7.68□□□□□ -1.18
SHM2YLR058C YGL015CP33199 130 aa7.68□□□□□ -1.18
SHM2YLR058C YER134CP40081 178 aa7.68□□□□□ -1.18
SHM2YLR058C YBR126W-AQ8TGU7 68 aa7.68□□□□□ -1.18
SHM2YLR058C RPL42AP0CX27 106 aaKnown RBP7.67□□□□□ -1.18
SHM2YLR058C RPL42BP0CX28 106 aaKnown RBP7.67□□□□□ -1.18
SHM2YLR058C TEM1P38987 245 aa7.66□□□□□ -1.18
SHM2YLR058C YIL014C-AQ02598 104 aa7.66□□□□□ -1.18
SHM2YLR058C SEN15Q04675 128 aa7.66□□□□□ -1.18
SHM2YLR058C SAL1D6W196 494 aa7.65□□□□□ -1.18
SHM2YLR058C YNL217WP40152 326 aa7.65□□□□□ -1.18
SHM2YLR058C OST3P48439 350 aa7.65□□□□□ -1.18
SHM2YLR058C SGF11Q03067 99 aa7.65□□□□□ -1.18
SHM2YLR058C YPR014CQ6B0W2 109 aa7.65□□□□□ -1.18
SHM2YLR058C YER076CP40049 302 aa7.64□□□□□ -1.19
SHM2YLR058C ATP23P53722 227 aa7.64□□□□□ -1.19
SHM2YLR058C MGR2Q02889 113 aa7.64□□□□□ -1.19
SHM2YLR058C PFY1P07274 126 aa7.63□□□□□ -1.19
SHM2YLR058C KRE9P39005 276 aa7.63□□□□□ -1.19
SHM2YLR058C ERG27Q12452 347 aaKnown RBP7.63□□□□□ -1.19
SHM2YLR058C DCV1P43595 202 aa7.62□□□□□ -1.19
SHM2YLR058C DGA1Q08650 418 aa7.62□□□□□ -1.19
SHM2YLR058C PRE1P22141 198 aaKnown RBP7.61□□□□□ -1.19
SHM2YLR058C HAL1Q01766 294 aa7.61□□□□□ -1.19
SHM2YLR058C YGR240C-AQ3E786 66 aa7.61□□□□□ -1.19
SHM2YLR058C YIL134C-AQ45U18 67 aa7.61□□□□□ -1.19
SHM2YLR058C AQY1P0CD91 305 aa7.61□□□□□ -1.19
SHM2YLR058C CDC40P40968 455 aaPredicted RBP7.61□□□□□ -1.19
SHM2YLR058C YJL028WP47062 111 aa7.61□□□□□ -1.19
SHM2YLR058C GLO1P50107 326 aa7.61□□□□□ -1.19
SHM2YLR058C YPT53P36019 220 aa7.59□□□□□ -1.19
SHM2YLR058C YKR070WP36151 352 aaKnown RBP7.59□□□□□ -1.19
SHM2YLR058C MRPL11P36521 249 aaPredicted RBP7.59□□□□□ -1.19
SHM2YLR058C FCF1Q05498 189 aaPredicted RBP7.59□□□□□ -1.19
SHM2YLR058C POP3P53833 195 aaPredicted RBP7.58□□□□□ -1.2
SHM2YLR058C COA6Q3E846 104 aa7.58□□□□□ -1.2
SHM2YLR058C UBC5P15732 148 aa7.57□□□□□ -1.2
SHM2YLR058C PCL2P25693 308 aa7.57□□□□□ -1.2
SHM2YLR058C TOS6P48560 102 aa7.57□□□□□ -1.2
SHM2YLR058C HTL1Q9URQ5 78 aa7.57□□□□□ -1.2
SHM2YLR058C RPS8AP0CX39 200 aaKnown RBP7.56□□□□□ -1.2
SHM2YLR058C RPS8BP0CX40 200 aaKnown RBP7.56□□□□□ -1.2
SHM2YLR058C PMP3P87284 55 aa7.56□□□□□ -1.2
SHM2YLR058C YDR042CQ03205 200 aa7.56□□□□□ -1.2
SHM2YLR058C ERV14P53173 138 aa7.55□□□□□ -1.2
SHM2YLR058C DPP1Q05521 289 aa7.55□□□□□ -1.2
SHM2YLR058C CRC1Q12289 327 aa7.55□□□□□ -1.2
SHM2YLR058C PAU16P35994 123 aa7.54□□□□□ -1.2
SHM2YLR058C RPL16AP26784 199 aaKnown RBP7.53□□□□□ -1.2
SHM2YLR058C YJR146WP47174 117 aa7.53□□□□□ -1.2
SHM2YLR058C YOR008C-AQ3E7B9 74 aa7.53□□□□□ -1.2
SHM2YLR058C RPL27BP0C2H7 136 aaKnown RBP7.52□□□□□ -1.21
SHM2YLR058C HMRA2P0CY13 119 aa7.52□□□□□ -1.21
SHM2YLR058C MRP49P32388 137 aa7.51□□□□□ -1.21
SHM2YLR058C YBR209WP38311 105 aa7.51□□□□□ -1.21
SHM2YLR058C CNL1Q06333 122 aa7.51□□□□□ -1.21
SHM2YLR058C YLR112WQ12130 139 aa7.51□□□□□ -1.21
SHM2YLR058C FYV4P38783 130 aaPredicted RBP7.5□□□□□ -1.21
SHM2YLR058C ARC15P40518 154 aaRIP-Chip data7.5□□□□□ -1.21not detected
SHM2YLR058C YGL088WP53151 121 aa7.5□□□□□ -1.21
SHM2YLR058C PKR1Q03880 122 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms