RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SET3	YKR029C	RPL37A	P49166	88 aa	Known RBP	0.53	□□□□□ -2.33
SET3	YKR029C	YGL193C	P53097	103 aa		0.53	□□□□□ -2.33
SET3	YKR029C	RAF1	Q06891	181 aa		0.53	□□□□□ -2.33
SET3	YKR029C	YGR035W-A	Q45U48	73 aa		0.53	□□□□□ -2.33
SET3	YKR029C	YGL041W-A	P0C5N3	154 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YCR099C	P25657	155 aa		0.52	□□□□□ -2.33
SET3	YKR029C	HSP150	P32478	413 aa		0.52	□□□□□ -2.33
SET3	YKR029C	SUI1	P32911	108 aa	Known RBP	0.52	□□□□□ -2.33
SET3	YKR029C	YIR020C	P40575	100 aa		0.52	□□□□□ -2.33
SET3	YKR029C	BLM10	P43583	2143 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YGL230C	P53074	147 aa		0.52	□□□□□ -2.33
SET3	YKR029C	ORM1	P53224	222 aa		0.52	□□□□□ -2.33
SET3	YKR029C	ATP19	P81451	68 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YDR102C	Q03864	110 aa		0.52	□□□□□ -2.33
SET3	YKR029C	KIN28	P06242	306 aa		0.52	□□□□□ -2.33
SET3	YKR029C	INO4	P13902	151 aa		0.52	□□□□□ -2.33
SET3	YKR029C	SHB17	P36136	271 aa	Known RBP	0.52	□□□□□ -2.33
SET3	YKR029C	YKR070W	P36151	352 aa	Known RBP	0.52	□□□□□ -2.33
SET3	YKR029C	YHL037C	P38733	133 aa		0.52	□□□□□ -2.33
SET3	YKR029C	AIM18	P38884	321 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YAR064W	P39563	99 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YJR015W	P47090	510 aa		0.52	□□□□□ -2.33
SET3	YKR029C	RRT7	Q07829	113 aa		0.52	□□□□□ -2.33
SET3	YKR029C	VAM10	Q08474	114 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YPR202W	Q08993	238 aa		0.52	□□□□□ -2.33
SET3	YKR029C	YHR214C-D	P0CX93	97 aa		0.51	□□□□□ -2.33
SET3	YKR029C	SPT14	P32363	452 aa		0.51	□□□□□ -2.33
SET3	YKR029C	ARC19	P33204	171 aa	Known RBP	0.51	□□□□□ -2.33
SET3	YKR029C	SLM6	P38343	150 aa		0.51	□□□□□ -2.33
SET3	YKR029C	SED1	Q01589	338 aa		0.51	□□□□□ -2.33
SET3	YKR029C	FMN1	Q03778	218 aa		0.51	□□□□□ -2.33
SET3	YKR029C	RAV2	Q03956	351 aa		0.51	□□□□□ -2.33
SET3	YKR029C	YDR278C	Q05612	105 aa		0.51	□□□□□ -2.33
SET3	YKR029C	FCY1	Q12178	158 aa		0.51	□□□□□ -2.33
SET3	YKR029C	YCL048W-A	Q2V2Q2	79 aa		0.51	□□□□□ -2.33
SET3	YKR029C	YOR032W-A	Q8TGS1	66 aa		0.51	□□□□□ -2.33
SET3	YKR029C	ECM31	P38122	312 aa		0.5	□□□□□ -2.33
SET3	YKR029C	YEL014C	P39999	101 aa		0.5	□□□□□ -2.33
SET3	YKR029C	YER181C	P40097	107 aa		0.5	□□□□□ -2.33
SET3	YKR029C	FIP1	P45976	327 aa		0.5	□□□□□ -2.33
SET3	YKR029C	YDC1	Q02896	317 aa		0.5	□□□□□ -2.33
SET3	YKR029C	AVO2	Q04749	426 aa		0.5	□□□□□ -2.33
SET3	YKR029C	NMA1	Q06178	401 aa	Known RBP	0.5	□□□□□ -2.33
SET3	YKR029C	KEI1	Q06346	221 aa		0.5	□□□□□ -2.33
SET3	YKR029C	PET20	Q99373	253 aa		0.5	□□□□□ -2.33
SET3	YKR029C	UBR1	P19812	1950 aa		0.5	□□□□□ -2.33
SET3	YKR029C	RPL39	P04650	51 aa		0.5	□□□□□ -2.33
SET3	YKR029C	HYP2	P23301	157 aa	Known RBP	0.5	□□□□□ -2.33
SET3	YKR029C	GLC8	P41818	229 aa		0.5	□□□□□ -2.33
SET3	YKR029C	RPL37B	P51402	88 aa	Known RBP	0.5	□□□□□ -2.33
SET3	YKR029C	EFM5	P53200	248 aa	Known RBP	0.5	□□□□□ -2.33
SET3	YKR029C	RCF2	P53721	224 aa		0.5	□□□□□ -2.33
SET3	YKR029C	PKR1	Q03880	122 aa	Known RBP	0.5	□□□□□ -2.33
SET3	YKR029C	YDL241W	Q07738	123 aa		0.5	□□□□□ -2.33
SET3	YKR029C	LCL2	Q08045	131 aa		0.5	□□□□□ -2.33
SET3	YKR029C	SLH1	P53327	1967 aa	Known RBP	0.5	□□□□□ -2.33
SET3	YKR029C	FMP49	A0A023PZB3	126 aa		0.49	□□□□□ -2.33
SET3	YKR029C	PHO13	P19881	312 aa		0.49	□□□□□ -2.33
SET3	YKR029C	SIP18	P50263	79 aa		0.49	□□□□□ -2.33
SET3	YKR029C	RFU1	Q08003	200 aa		0.49	□□□□□ -2.33
SET3	YKR029C	CCW12	Q12127	133 aa		0.49	□□□□□ -2.33
SET3	YKR029C	GTT2	Q12390	233 aa		0.49	□□□□□ -2.33
SET3	YKR029C	AUA1	P32450	94 aa		0.49	□□□□□ -2.33
SET3	YKR029C	MRPL24	P36525	258 aa	Predicted RBP	0.49	□□□□□ -2.33
SET3	YKR029C	GAT4	P40569	121 aa		0.49	□□□□□ -2.33
SET3	YKR029C	GPI2	P46961	280 aa		0.49	□□□□□ -2.33
SET3	YKR029C	VMA10	P48836	114 aa	Known RBP	0.49	□□□□□ -2.33
SET3	YKR029C	AIM36	Q03798	255 aa		0.49	□□□□□ -2.33
SET3	YKR029C	IRC19	Q07843	230 aa		0.49	□□□□□ -2.33
SET3	YKR029C	FIT3	Q08907	204 aa		0.49	□□□□□ -2.33
SET3	YKR029C	MRS4	P23500	304 aa		0.48	□□□□□ -2.33
SET3	YKR029C	SRP21	P32342	167 aa		0.48	□□□□□ -2.33
SET3	YKR029C	UGX2	P32772	223 aa		0.48	□□□□□ -2.33
SET3	YKR029C	YBR027C	P38220	110 aa		0.48	□□□□□ -2.33
SET3	YKR029C	TMA23	Q03525	211 aa		0.48	□□□□□ -2.33
SET3	YKR029C	YPR153W	Q06537	140 aa		0.48	□□□□□ -2.33
SET3	YKR029C	YOR072W	Q08486	104 aa		0.48	□□□□□ -2.33
SET3	YKR029C	YER188C-A	P0C0V2	99 aa		0.48	□□□□□ -2.33
SET3	YKR029C	PET54	P10834	293 aa		0.48	□□□□□ -2.33
SET3	YKR029C	MOG1	P47123	218 aa		0.48	□□□□□ -2.33
SET3	YKR029C	CSN9	Q03981	162 aa		0.48	□□□□□ -2.33
SET3	YKR029C	SCS22	Q6Q595	175 aa		0.48	□□□□□ -2.33
SET3	YKR029C	QCR6	P00127	147 aa		0.47	□□□□□ -2.33
SET3	YKR029C	HSP12	P22943	109 aa	Known RBP	0.47	□□□□□ -2.33
SET3	YKR029C	YCR001W	P25347	104 aa		0.47	□□□□□ -2.33
SET3	YKR029C	IPT1	P38954	527 aa		0.47	□□□□□ -2.33
SET3	YKR029C	YJL218W	P40892	196 aa	Known RBP	0.47	□□□□□ -2.33
SET3	YKR029C	NCE101	Q02820	53 aa		0.47	□□□□□ -2.33
SET3	YKR029C	EST3	Q03096	181 aa		0.47	□□□□□ -2.33
SET3	YKR029C	GPI11	Q06636	219 aa		0.47	□□□□□ -2.33
SET3	YKR029C	HUT1	Q12520	339 aa		0.47	□□□□□ -2.33
SET3	YKR029C	CMC4	Q3E7A9	73 aa		0.47	□□□□□ -2.33
SET3	YKR029C	NHP6A	P11632	93 aa	Known RBP	0.47	□□□□□ -2.33
SET3	YKR029C	DDR48	P18899	430 aa	Known RBP	0.47	□□□□□ -2.33
SET3	YKR029C	SRL3	P36167	246 aa		0.47	□□□□□ -2.33
SET3	YKR029C	IPI1	P38803	334 aa	Predicted RBP	0.47	□□□□□ -2.33
SET3	YKR029C	RPS12	P48589	143 aa	Known RBP	0.47	□□□□□ -2.33
SET3	YKR029C	SPG1	P50088	95 aa		0.47	□□□□□ -2.33
SET3	YKR029C	YNL122C	P53921	115 aa	Predicted RBP	0.47	□□□□□ -2.33
SET3	YKR029C	YDR366C	P87287	132 aa		0.47	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms