RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeast

Gene MDE1, Length 735 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDE1	YJR024C	YGL118C	P53132	145 aa		4.91	□□□□□ -1.62
MDE1	YJR024C	GPI19	Q04082	140 aa		4.91	□□□□□ -1.62
MDE1	YJR024C	ARC18	Q05933	178 aa	Known RBP	4.91	□□□□□ -1.62
MDE1	YJR024C	CCW12	Q12127	133 aa		4.91	□□□□□ -1.62
MDE1	YJR024C	ERG27	Q12452	347 aa	Known RBP	4.91	□□□□□ -1.62
MDE1	YJR024C	TAR1	Q8TGM6	124 aa		4.91	□□□□□ -1.62
MDE1	YJR024C	YLR415C	O13578	112 aa		4.9	□□□□□ -1.63
MDE1	YJR024C	UTR5	P32630	166 aa		4.9	□□□□□ -1.63
MDE1	YJR024C	ALG13	P53178	202 aa		4.9	□□□□□ -1.63
MDE1	YJR024C	MOT3	P54785	490 aa	Known RBP	4.9	□□□□□ -1.63
MDE1	YJR024C	YOL085C	Q99345	113 aa		4.9	□□□□□ -1.63
MDE1	YJR024C	VMA16	P23968	213 aa		4.89	□□□□□ -1.63
MDE1	YJR024C	GSP1	P32835	219 aa	Known RBP	4.89	□□□□□ -1.63
MDE1	YJR024C	GSP2	P32836	220 aa	Known RBP	4.89	□□□□□ -1.63
MDE1	YJR024C	YBR144C	P34215	104 aa		4.89	□□□□□ -1.63
MDE1	YJR024C	KEG1	P43614	200 aa		4.89	□□□□□ -1.63
MDE1	YJR024C	YMR244W	Q04018	355 aa		4.89	□□□□□ -1.63
MDE1	YJR024C	AGA1	P32323	725 aa		4.88	□□□□□ -1.63
MDE1	YJR024C	ECM33	P38248	429 aa	Known RBP	4.88	□□□□□ -1.63
MDE1	YJR024C	TEM1	P38987	245 aa		4.88	□□□□□ -1.63
MDE1	YJR024C	YNL200C	P40165	246 aa	Known RBP	4.88	□□□□□ -1.63
MDE1	YJR024C	CDC40	P40968	455 aa	Predicted RBP	4.88	□□□□□ -1.63
MDE1	YJR024C	MIC26	P50087	233 aa		4.88	□□□□□ -1.63
MDE1	YJR024C	MRPS8	Q03799	155 aa		4.88	□□□□□ -1.63
MDE1	YJR024C	YKL102C	P34249	101 aa		4.87	□□□□□ -1.63
MDE1	YJR024C	MPC2	P38857	129 aa		4.87	□□□□□ -1.63
MDE1	YJR024C	MIG3	P39943	394 aa		4.87	□□□□□ -1.63
MDE1	YJR024C	AGE2	P40529	298 aa		4.87	□□□□□ -1.63
MDE1	YJR024C	ERV14	P53173	138 aa		4.87	□□□□□ -1.63
MDE1	YJR024C	BRP1	P53194	125 aa		4.87	□□□□□ -1.63
MDE1	YJR024C	VAR1	P02381	398 aa		4.86	□□□□□ -1.63
MDE1	YJR024C	FUN14	P18411	198 aa		4.86	□□□□□ -1.63
MDE1	YJR024C	ELF1	P36053	145 aa		4.86	□□□□□ -1.63
MDE1	YJR024C	YKR032W	P36127	104 aa		4.86	□□□□□ -1.63
MDE1	YJR024C	DUO1	P53168	247 aa	Known RBP	4.86	□□□□□ -1.63
MDE1	YJR024C	Q0255	P03881	472 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	PAU16	P35994	123 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	PET8	P38921	284 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	YJL028W	P47062	111 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	TVP18	Q04767	167 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	YBR200W-A	Q3E755	54 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	YPR014C	Q6B0W2	109 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	HTL1	Q9URQ5	78 aa		4.85	□□□□□ -1.63
MDE1	YJR024C	YDR366C	P87287	132 aa		4.84	□□□□□ -1.63
MDE1	YJR024C	CNL1	Q06333	122 aa		4.84	□□□□□ -1.63
MDE1	YJR024C	YCR023C	P25351	611 aa		4.83	□□□□□ -1.64
MDE1	YJR024C	RPL16B	P26785	198 aa	Known RBP	4.83	□□□□□ -1.64
MDE1	YJR024C	MIG1	P27705	504 aa		4.83	□□□□□ -1.64
MDE1	YJR024C	SCM4	P32564	187 aa		4.83	□□□□□ -1.64
MDE1	YJR024C	KTI12	P34253	313 aa	Known RBP	4.83	□□□□□ -1.64
MDE1	YJR024C	YER076C	P40049	302 aa		4.83	□□□□□ -1.64
MDE1	YJR024C	POP3	P53833	195 aa	Predicted RBP	4.83	□□□□□ -1.64
MDE1	YJR024C	YDR274C	P87283	123 aa		4.83	□□□□□ -1.64
MDE1	YJR024C	YIL014C-A	Q02598	104 aa		4.83	□□□□□ -1.64
MDE1	YJR024C	GRH1	Q04410	372 aa	Known RBP	4.83	□□□□□ -1.64
MDE1	YJR024C	SAL1	D6W196	494 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	RPL42A	P0CX27	106 aa	Known RBP	4.82	□□□□□ -1.64
MDE1	YJR024C	RPL42B	P0CX28	106 aa	Known RBP	4.82	□□□□□ -1.64
MDE1	YJR024C	RPS11A	P0CX47	156 aa	Known RBP	4.82	□□□□□ -1.64
MDE1	YJR024C	RPS11B	P0CX48	156 aa	Known RBP	4.82	□□□□□ -1.64
MDE1	YJR024C	MRPL44	P19956	98 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	YFR035C	P43608	114 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	ATP23	P53722	227 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	DPP1	Q05521	289 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	MSC3	Q05812	728 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	FYV7	Q12247	151 aa		4.82	□□□□□ -1.64
MDE1	YJR024C	TPT1	Q12272	230 aa	Known RBP	4.82	□□□□□ -1.64
MDE1	YJR024C	PFY1	P07274	126 aa		4.81	□□□□□ -1.64
MDE1	YJR024C	RPL2A	P0CX45	254 aa	Known RBP	4.81	□□□□□ -1.64
MDE1	YJR024C	RPL2B	P0CX46	254 aa	Known RBP	4.81	□□□□□ -1.64
MDE1	YJR024C	MGR2	Q02889	113 aa		4.81	□□□□□ -1.64
MDE1	YJR024C	AIM34	Q03673	198 aa		4.81	□□□□□ -1.64
MDE1	YJR024C	PKR1	Q03880	122 aa	Known RBP	4.81	□□□□□ -1.64
MDE1	YJR024C	LSO2	Q3E772	92 aa	Known RBP	4.81	□□□□□ -1.64
MDE1	YJR024C	AQY1	P0CD91	305 aa		4.8	□□□□□ -1.64
MDE1	YJR024C	PRE1	P22141	198 aa	Known RBP	4.8	□□□□□ -1.64
MDE1	YJR024C	VHS2	P40463	436 aa		4.8	□□□□□ -1.64
MDE1	YJR024C	HAC1	P41546	238 aa		4.8	□□□□□ -1.64
MDE1	YJR024C	YLR042C	Q07990	161 aa		4.8	□□□□□ -1.64
MDE1	YJR024C	YLR050C	Q12155	161 aa	Known RBP	4.8	□□□□□ -1.64
MDE1	YJR024C	RPL27B	P0C2H7	136 aa	Known RBP	4.79	□□□□□ -1.64
MDE1	YJR024C	FYV4	P38783	130 aa	Predicted RBP	4.79	□□□□□ -1.64
MDE1	YJR024C	RRT13	P40042	185 aa		4.79	□□□□□ -1.64
MDE1	YJR024C	YCH1	P42937	148 aa		4.79	□□□□□ -1.64
MDE1	YJR024C	GLO1	P50107	326 aa		4.79	□□□□□ -1.64
MDE1	YJR024C	YDR042C	Q03205	200 aa		4.79	□□□□□ -1.64
MDE1	YJR024C	FCF1	Q05498	189 aa	Predicted RBP	4.79	□□□□□ -1.64
MDE1	YJR024C	NAT5	Q08689	176 aa		4.79	□□□□□ -1.64
MDE1	YJR024C	ATP5	P09457	212 aa		4.78	□□□□□ -1.64
MDE1	YJR024C	APS1	P35181	156 aa		4.78	□□□□□ -1.64
MDE1	YJR024C	DCV1	P43595	202 aa		4.78	□□□□□ -1.64
MDE1	YJR024C	SCS22	Q6Q595	175 aa		4.78	□□□□□ -1.64
MDE1	YJR024C	HMRA2	P0CY13	119 aa		4.77	□□□□□ -1.65
MDE1	YJR024C	SEC11	P15367	167 aa		4.77	□□□□□ -1.65
MDE1	YJR024C	YKR070W	P36151	352 aa	Known RBP	4.77	□□□□□ -1.65
MDE1	YJR024C	MSL1	P40567	111 aa	Predicted RBP	4.77	□□□□□ -1.65
MDE1	YJR024C	TOS6	P48560	102 aa		4.77	□□□□□ -1.65
MDE1	YJR024C	YGL230C	P53074	147 aa		4.77	□□□□□ -1.65
MDE1	YJR024C	SAE3	P89114	91 aa		4.77	□□□□□ -1.65
MDE1	YJR024C	COX12	Q01519	83 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 88.8 ms