RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W RPP1AP05318 106 aaPredicted RBP5.91□□□□□ -1.46
CPD1YGR247W QRI5P32344 111 aa5.91□□□□□ -1.46
CPD1YGR247W SRP14P38985 146 aa5.91□□□□□ -1.46
CPD1YGR247W THG1P53215 237 aaKnown RBP5.91□□□□□ -1.46
CPD1YGR247W ZRT1P32804 376 aa5.9□□□□□ -1.46
CPD1YGR247W DCV1P43595 202 aa5.9□□□□□ -1.46
CPD1YGR247W DAD3P69850 94 aa5.9□□□□□ -1.46
CPD1YGR247W YLR194CQ05777 254 aa5.9□□□□□ -1.46
CPD1YGR247W SNA2P56508 79 aa5.89□□□□□ -1.47
CPD1YGR247W ARC18Q05933 178 aaKnown RBP5.89□□□□□ -1.47
CPD1YGR247W GTO3Q04806 366 aa5.88□□□□□ -1.47
CPD1YGR247W DCN1Q12395 269 aa5.88□□□□□ -1.47
CPD1YGR247W MRPS9P38120 278 aa5.87□□□□□ -1.47
CPD1YGR247W YAL064WP39711 94 aa5.87□□□□□ -1.47
CPD1YGR247W RPC10P40422 70 aa5.87□□□□□ -1.47
CPD1YGR247W CIN5P40917 295 aa5.87□□□□□ -1.47
CPD1YGR247W OST3P48439 350 aa5.87□□□□□ -1.47
CPD1YGR247W FMP49A0A023PZB3 126 aa5.86□□□□□ -1.47
CPD1YGR247W YBL081WP38180 368 aaKnown RBP5.86□□□□□ -1.47
CPD1YGR247W PAU7P39545 55 aa5.86□□□□□ -1.47
CPD1YGR247W PAU5P43575 122 aa5.86□□□□□ -1.47
CPD1YGR247W PLP1Q04004 230 aa5.86□□□□□ -1.47
CPD1YGR247W DDR48P18899 430 aaKnown RBP5.85□□□□□ -1.47
CPD1YGR247W SMP1P38128 452 aa5.85□□□□□ -1.47
CPD1YGR247W SEC72P39742 193 aaKnown RBP5.85□□□□□ -1.47
CPD1YGR247W YGR149WP48236 432 aa5.85□□□□□ -1.47
CPD1YGR247W YBR209WP38311 105 aa5.84□□□□□ -1.47
CPD1YGR247W YER076CP40049 302 aa5.84□□□□□ -1.47
CPD1YGR247W PHS1P40857 217 aa5.84□□□□□ -1.47
CPD1YGR247W TY1A-ORP0CX59 440 aa5.83□□□□□ -1.48
CPD1YGR247W TY1A-PR2P0CX60 440 aa5.83□□□□□ -1.48
CPD1YGR247W SDH8P38345 138 aa5.83□□□□□ -1.48
CPD1YGR247W SNN1P48232 102 aa5.83□□□□□ -1.48
CPD1YGR247W YGL088WP53151 121 aa5.83□□□□□ -1.48
CPD1YGR247W YDR010CQ12426 110 aa5.83□□□□□ -1.48
CPD1YGR247W ENV10Q99382 181 aa5.83□□□□□ -1.48
CPD1YGR247W HMRA1P0CY11 126 aa5.82□□□□□ -1.48
CPD1YGR247W RPL32P38061 130 aaKnown RBP5.82□□□□□ -1.48
CPD1YGR247W VMA7P39111 118 aa5.82□□□□□ -1.48
CPD1YGR247W AIM19P40502 157 aa5.8□□□□□ -1.48
CPD1YGR247W MHR1Q06630 226 aa5.8□□□□□ -1.48
CPD1YGR247W POM33Q12164 279 aa5.8□□□□□ -1.48
CPD1YGR247W YBL112CQ3E7Y4 105 aa5.8□□□□□ -1.48
CPD1YGR247W YKR070WP36151 352 aaKnown RBP5.79□□□□□ -1.48
CPD1YGR247W AIM29P36154 155 aa5.79□□□□□ -1.48
CPD1YGR247W PEX22P39718 180 aa5.79□□□□□ -1.48
CPD1YGR247W YER085CP40058 173 aa5.79□□□□□ -1.48
CPD1YGR247W SDS23P53172 527 aa5.79□□□□□ -1.48
CPD1YGR247W YBR298C-AQ8TGK4 73 aa5.79□□□□□ -1.48
CPD1YGR247W ADH2P00331 348 aaKnown RBP5.78□□□□□ -1.48
CPD1YGR247W YKR032WP36127 104 aa5.78□□□□□ -1.48
CPD1YGR247W GLO1P50107 326 aa5.78□□□□□ -1.48
CPD1YGR247W YLR118CQ12354 227 aa5.78□□□□□ -1.48
CPD1YGR247W BNS1P50084 137 aa5.77□□□□□ -1.49
CPD1YGR247W YMR175W-AQ3E766 64 aa5.77□□□□□ -1.49
CPD1YGR247W VMA9Q3E7B6 73 aa5.77□□□□□ -1.49
CPD1YGR247W TRP1P00912 224 aa5.76□□□□□ -1.49
CPD1YGR247W LAC1P28496 418 aa5.76□□□□□ -1.49
CPD1YGR247W LDS1P31379 325 aa5.76□□□□□ -1.49
CPD1YGR247W YIL024CP40543 189 aa5.76□□□□□ -1.49
CPD1YGR247W DAN1P47178 298 aa5.76□□□□□ -1.49
CPD1YGR247W HYP2P23301 157 aaKnown RBP5.75□□□□□ -1.49
CPD1YGR247W YGL010WP25338 174 aa5.75□□□□□ -1.49
CPD1YGR247W YAR029WP39549 74 aa5.75□□□□□ -1.49
CPD1YGR247W YJR146WP47174 117 aa5.75□□□□□ -1.49
CPD1YGR247W UBC12P52491 188 aa5.75□□□□□ -1.49
CPD1YGR247W YCL021W-AQ96VH3 125 aa5.75□□□□□ -1.49
CPD1YGR247W TY1A-DR4O74302 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-AP0CX57 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-PR1P0CX58 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-DR5P0CX65 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-ER2P0CX66 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-GR3P0CX67 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-LR1P0CX68 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-MR2P0CX69 440 aa5.74□□□□□ -1.49
CPD1YGR247W PAM17P36147 197 aa5.74□□□□□ -1.49
CPD1YGR247W YBR219CP38317 127 aa5.74□□□□□ -1.49
CPD1YGR247W HSP10P38910 106 aa5.74□□□□□ -1.49
CPD1YGR247W VTC1P40046 129 aaRIP-Chip data5.74□□□□□ -1.49not detected
CPD1YGR247W TY1A-JR2P47099 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-DR1Q03856 440 aa5.74□□□□□ -1.49
CPD1YGR247W TY1A-ML1Q04706 440 aaKnown RBP5.74□□□□□ -1.49
CPD1YGR247W TY1A-GR2Q12485 440 aa5.74□□□□□ -1.49
CPD1YGR247W YNR034W-AQ3E841 98 aa5.74□□□□□ -1.49
CPD1YGR247W ECM12O13529 151 aa5.73□□□□□ -1.49
CPD1YGR247W YEL008WP40001 126 aa5.73□□□□□ -1.49
CPD1YGR247W APS2Q00381 147 aa5.73□□□□□ -1.49
CPD1YGR247W YGL041C-BQ3E750 60 aa5.73□□□□□ -1.49
CPD1YGR247W Q0142Q9ZZW4 58 aa5.73□□□□□ -1.49
CPD1YGR247W RPL23AP0CX41 137 aaKnown RBP5.72□□□□□ -1.49
CPD1YGR247W RPL23BP0CX42 137 aaKnown RBP5.72□□□□□ -1.49
CPD1YGR247W HAC1P41546 238 aa5.72□□□□□ -1.49
CPD1YGR247W ERG27Q12452 347 aaKnown RBP5.72□□□□□ -1.49
CPD1YGR247W PFY1P07274 126 aa5.71□□□□□ -1.5
CPD1YGR247W PET8P38921 284 aa5.7□□□□□ -1.5
CPD1YGR247W FMP16Q12497 93 aa5.7□□□□□ -1.5
CPD1YGR247W FSF1Q12029 327 aaKnown RBP5.69□□□□□ -1.5
CPD1YGR247W NHP6AP11632 93 aaKnown RBP5.68□□□□□ -1.5
CPD1YGR247W SRB6P32570 121 aa5.68□□□□□ -1.5
CPD1YGR247W YKL070WP36087 169 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms