RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	YKR032W	P36127	104 aa		4.11	□□□□□ -1.75
SHE10	YGL228W	YHR140W	P38842	239 aa		4.11	□□□□□ -1.75
SHE10	YGL228W	PET8	P38921	284 aa		4.11	□□□□□ -1.75
SHE10	YGL228W	MED7	Q08278	222 aa		4.11	□□□□□ -1.75
SHE10	YGL228W	POM33	Q12164	279 aa		4.11	□□□□□ -1.75
SHE10	YGL228W	FRS1	P15624	595 aa	Known RBP	4.1	□□□□□ -1.75
SHE10	YGL228W	YER134C	P40081	178 aa		4.1	□□□□□ -1.75
SHE10	YGL228W	COX16	P47081	118 aa		4.1	□□□□□ -1.75
SHE10	YGL228W	MSC3	Q05812	728 aa		4.1	□□□□□ -1.75
SHE10	YGL228W	WIP1	Q2V2P8	89 aa		4.1	□□□□□ -1.75
SHE10	YGL228W	YBR200W-A	Q3E755	54 aa		4.1	□□□□□ -1.75
SHE10	YGL228W	Q0255	P03881	472 aa		4.09	□□□□□ -1.75
SHE10	YGL228W	RPL16B	P26785	198 aa	Known RBP	4.09	□□□□□ -1.75
SHE10	YGL228W	YNL200C	P40165	246 aa	Known RBP	4.09	□□□□□ -1.75
SHE10	YGL228W	KEG1	P43614	200 aa		4.09	□□□□□ -1.75
SHE10	YGL228W	CUE4	Q04201	117 aa	Predicted RBP	4.09	□□□□□ -1.75
SHE10	YGL228W	GSP1	P32835	219 aa	Known RBP	4.09	□□□□□ -1.76
SHE10	YGL228W	GSP2	P32836	220 aa	Known RBP	4.09	□□□□□ -1.76
SHE10	YGL228W	OST3	P48439	350 aa		4.09	□□□□□ -1.76
SHE10	YGL228W	BRP1	P53194	125 aa		4.09	□□□□□ -1.76
SHE10	YGL228W	ERG27	Q12452	347 aa	Known RBP	4.09	□□□□□ -1.76
SHE10	YGL228W	YPR053C	Q6Q5F3	151 aa		4.09	□□□□□ -1.76
SHE10	YGL228W	RPS11A	P0CX47	156 aa	Known RBP	4.08	□□□□□ -1.76
SHE10	YGL228W	RPS11B	P0CX48	156 aa	Known RBP	4.08	□□□□□ -1.76
SHE10	YGL228W	NRG2	P38082	220 aa		4.08	□□□□□ -1.76
SHE10	YGL228W	RRT13	P40042	185 aa		4.08	□□□□□ -1.76
SHE10	YGL228W	EOS1	P53938	366 aa		4.08	□□□□□ -1.76
SHE10	YGL228W	CMC2	Q3E7A4	109 aa		4.08	□□□□□ -1.76
SHE10	YGL228W	YIL134C-A	Q45U18	67 aa		4.08	□□□□□ -1.76
SHE10	YGL228W	RPL2A	P0CX45	254 aa	Known RBP	4.07	□□□□□ -1.76
SHE10	YGL228W	RPL2B	P0CX46	254 aa	Known RBP	4.07	□□□□□ -1.76
SHE10	YGL228W	PCL2	P25693	308 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	MLF3	P32047	452 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	COX12	Q01519	83 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	YLR122C	Q12312	125 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	SEC72	P39742	193 aa	Known RBP	4.07	□□□□□ -1.76
SHE10	YGL228W	VHS2	P40463	436 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	CDC40	P40968	455 aa	Predicted RBP	4.07	□□□□□ -1.76
SHE10	YGL228W	YJL028W	P47062	111 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	YDR366C	P87287	132 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	YIL014C-A	Q02598	104 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	YLR281C	Q05863	155 aa		4.07	□□□□□ -1.76
SHE10	YGL228W	TEM1	P38987	245 aa		4.06	□□□□□ -1.76
SHE10	YGL228W	YGL118C	P53132	145 aa		4.06	□□□□□ -1.76
SHE10	YGL228W	AIM34	Q03673	198 aa		4.06	□□□□□ -1.76
SHE10	YGL228W	YLR042C	Q07990	161 aa		4.06	□□□□□ -1.76
SHE10	YGL228W	YPR014C	Q6B0W2	109 aa		4.06	□□□□□ -1.76
SHE10	YGL228W	PRE1	P22141	198 aa	Known RBP	4.05	□□□□□ -1.76
SHE10	YGL228W	YCR001W	P25347	104 aa		4.05	□□□□□ -1.76
SHE10	YGL228W	KTI12	P34253	313 aa	Known RBP	4.05	□□□□□ -1.76
SHE10	YGL228W	MRPL11	P36521	249 aa	Predicted RBP	4.05	□□□□□ -1.76
SHE10	YGL228W	CGR1	P53188	120 aa		4.05	□□□□□ -1.76
SHE10	YGL228W	TVP18	Q04767	167 aa		4.05	□□□□□ -1.76
SHE10	YGL228W	SAL1	D6W196	494 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	YCR023C	P25351	611 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	YER076C	P40049	302 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	YIL002W-A	Q3E7Z5	69 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	AUA1	P32450	94 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	YPS5	P53057	165 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	MGR2	Q02889	113 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	MET32	Q12041	191 aa		4.04	□□□□□ -1.76
SHE10	YGL228W	CYC7	P00045	113 aa		4.03	□□□□□ -1.76
SHE10	YGL228W	AQY1	P0CD91	305 aa		4.03	□□□□□ -1.76
SHE10	YGL228W	RPL42A	P0CX27	106 aa	Known RBP	4.03	□□□□□ -1.76
SHE10	YGL228W	RPL42B	P0CX28	106 aa	Known RBP	4.03	□□□□□ -1.76
SHE10	YGL228W	ELF1	P36053	145 aa		4.03	□□□□□ -1.76
SHE10	YGL228W	ATP23	P53722	227 aa		4.03	□□□□□ -1.76
SHE10	YGL228W	POP3	P53833	195 aa	Predicted RBP	4.03	□□□□□ -1.76
SHE10	YGL228W	RDS3	Q06835	107 aa	Predicted RBP	4.03	□□□□□ -1.76
SHE10	YGL228W	PFY1	P07274	126 aa		4.02	□□□□□ -1.77
SHE10	YGL228W	YNL217W	P40152	326 aa		4.02	□□□□□ -1.77
SHE10	YGL228W	YCH1	P42937	148 aa		4.02	□□□□□ -1.77
SHE10	YGL228W	COA6	Q3E846	104 aa		4.02	□□□□□ -1.77
SHE10	YGL228W	PAU16	P35994	123 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	KRE9	P39005	276 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	DCV1	P43595	202 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	GLO1	P50107	326 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	FCF1	Q05498	189 aa	Predicted RBP	4.01	□□□□□ -1.77
SHE10	YGL228W	DPP1	Q05521	289 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	YPT53	P36019	220 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
SHE10	YGL228W	DGA1	Q08650	418 aa		4.01	□□□□□ -1.77
SHE10	YGL228W	LSM8	P47093	109 aa	Known RBP	4	□□□□□ -1.77
SHE10	YGL228W	YDR042C	Q03205	200 aa		4	□□□□□ -1.77
SHE10	YGL228W	SCW10	Q04951	389 aa		4	□□□□□ -1.77
SHE10	YGL228W	TPT1	Q12272	230 aa	Known RBP	4	□□□□□ -1.77
SHE10	YGL228W	SCS22	Q6Q595	175 aa		4	□□□□□ -1.77
SHE10	YGL228W	YKR070W	P36151	352 aa	Known RBP	3.99	□□□□□ -1.77
SHE10	YGL228W	FYV4	P38783	130 aa	Predicted RBP	3.99	□□□□□ -1.77
SHE10	YGL228W	ERV14	P53173	138 aa		3.99	□□□□□ -1.77
SHE10	YGL228W	PKR1	Q03880	122 aa	Known RBP	3.99	□□□□□ -1.77
SHE10	YGL228W	VAM10	Q08474	114 aa		3.99	□□□□□ -1.77
SHE10	YGL228W	YCR075W-A	Q3E830	75 aa		3.99	□□□□□ -1.77
SHE10	YGL228W	HMRA2	P0CY13	119 aa		3.98	□□□□□ -1.77
SHE10	YGL228W	FUN14	P18411	198 aa		3.98	□□□□□ -1.77
SHE10	YGL228W	TOS6	P48560	102 aa		3.98	□□□□□ -1.77
SHE10	YGL228W	YLR112W	Q12130	139 aa		3.98	□□□□□ -1.77
SHE10	YGL228W	YBR126W-A	Q8TGU7	68 aa		3.98	□□□□□ -1.77
SHE10	YGL228W	RPL16A	P26784	199 aa	Known RBP	3.98	□□□□□ -1.77
SHE10	YGL228W	YJR146W	P47174	117 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 137.2 ms