RNA–Protein interactions for RNA: YDR475C

JIP4, Transcript of Protein of unknown function, yeast

Gene JIP4, Length 2,631 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
JIP4	YDR475C	RIM9	Q04734	239 aa		4.66	□□□□□ -1.66
JIP4	YDR475C	CPA1	P07258	411 aa	Known RBP	4.66	□□□□□ -1.66
JIP4	YDR475C	INO4	P13902	151 aa		4.66	□□□□□ -1.66
JIP4	YDR475C	MID2	P36027	376 aa		4.66	□□□□□ -1.66
JIP4	YDR475C	MRPL27	P36526	146 aa	Predicted RBP	4.66	□□□□□ -1.66
JIP4	YDR475C	KSH1	Q8TGJ3	72 aa		4.66	□□□□□ -1.66
JIP4	YDR475C	YAR068W	P39564	161 aa		4.65	□□□□□ -1.66
JIP4	YDR475C	FLX1	P40464	311 aa		4.65	□□□□□ -1.66
JIP4	YDR475C	YGL010W	P25338	174 aa		4.65	□□□□□ -1.67
JIP4	YDR475C	MRPL11	P36521	249 aa	Predicted RBP	4.65	□□□□□ -1.67
JIP4	YDR475C	YFR045W	P43617	309 aa		4.65	□□□□□ -1.67
JIP4	YDR475C	HAL1	Q01766	294 aa		4.65	□□□□□ -1.67
JIP4	YDR475C	YNL217W	P40152	326 aa		4.64	□□□□□ -1.67
JIP4	YDR475C	KNH1	P50112	268 aa		4.64	□□□□□ -1.67
JIP4	YDR475C	SWC7	Q06707	132 aa		4.64	□□□□□ -1.67
JIP4	YDR475C	YOL131W	Q08270	108 aa		4.64	□□□□□ -1.67
JIP4	YDR475C	RAS2	P01120	322 aa	Known RBP	4.64	□□□□□ -1.67
JIP4	YDR475C	LSM2	P38203	95 aa	Known RBP	4.64	□□□□□ -1.67
JIP4	YDR475C	GCV3	P39726	170 aa	Predicted RBP	4.63	□□□□□ -1.67
JIP4	YDR475C	RRT13	P40042	185 aa		4.63	□□□□□ -1.67
JIP4	YDR475C	ARC15	P40518	154 aa	RIP-Chip data	4.63	□□□□□ -1.67	not detected
JIP4	YDR475C	YFR035C	P43608	114 aa		4.63	□□□□□ -1.67
JIP4	YDR475C	TDA2	P40045	126 aa		4.63	□□□□□ -1.67
JIP4	YDR475C	NAT5	Q08689	176 aa		4.63	□□□□□ -1.67
JIP4	YDR475C	MOT1	P32333	1867 aa		4.63	□□□□□ -1.67
JIP4	YDR475C	MPC1	P53157	130 aa	Known RBP	4.62	□□□□□ -1.67
JIP4	YDR475C	FIT3	Q08907	204 aa		4.62	□□□□□ -1.67
JIP4	YDR475C	RAD6	P06104	172 aa		4.62	□□□□□ -1.67
JIP4	YDR475C	RPS25B	P0C0T4	108 aa	Known RBP	4.62	□□□□□ -1.67
JIP4	YDR475C	PAU15	P40585	124 aa		4.62	□□□□□ -1.67
JIP4	YDR475C	YFL067W	P43537	175 aa		4.62	□□□□□ -1.67
JIP4	YDR475C	YMR295C	Q03559	197 aa		4.62	□□□□□ -1.67
JIP4	YDR475C	PBA1	Q05778	276 aa		4.62	□□□□□ -1.67
JIP4	YDR475C	RPS25A	Q3E792	108 aa	Predicted RBP	4.62	□□□□□ -1.67
JIP4	YDR475C	FMT1	P32785	401 aa		4.61	□□□□□ -1.67
JIP4	YDR475C	IGD1	P43598	195 aa		4.61	□□□□□ -1.67
JIP4	YDR475C	YOS1	Q3E834	85 aa		4.61	□□□□□ -1.67
JIP4	YDR475C	CDC39	P25655	2108 aa	Known RBP	4.6	□□□□□ -1.67
JIP4	YDR475C	THG1	P53215	237 aa	Known RBP	4.6	□□□□□ -1.67
JIP4	YDR475C	PAU12	P53343	120 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	PAU23	Q07987	124 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	PAU17	Q12370	124 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	YHR032W-A	P0C5N6	59 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	MRP17	P28778	131 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	UTR5	P32630	166 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	CAX4	P53223	239 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	LIP1	Q03579	150 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	AVO2	Q04749	426 aa		4.6	□□□□□ -1.67
JIP4	YDR475C	MZM1	Q03429	123 aa	Predicted RBP	4.59	□□□□□ -1.67
JIP4	YDR475C	FIT1	Q04433	528 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	FKS3	Q04952	1785 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	PAI3	P01094	68 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	KRE9	P39005	276 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	YNR077C	P53758	84 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	GPI19	Q04082	140 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	IRC25	Q07951	179 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	YLR365W	Q7LIF2	110 aa		4.59	□□□□□ -1.67
JIP4	YDR475C	YCR099C	P25657	155 aa		4.59	□□□□□ -1.68
JIP4	YDR475C	YMR090W	Q04304	227 aa	Known RBP	4.59	□□□□□ -1.68
JIP4	YDR475C	FZF1	P32805	299 aa		4.58	□□□□□ -1.68
JIP4	YDR475C	CWP2	P43497	92 aa		4.58	□□□□□ -1.68
JIP4	YDR475C	DSK2	P48510	373 aa		4.58	□□□□□ -1.68
JIP4	YDR475C	SCW4	P53334	386 aa	Known RBP	4.58	□□□□□ -1.68
JIP4	YDR475C	MRPS8	Q03799	155 aa		4.58	□□□□□ -1.68
JIP4	YDR475C	RIF1	P29539	1916 aa		4.58	□□□□□ -1.68
JIP4	YDR475C	MHF2	Q3E829	80 aa		4.58	□□□□□ -1.68
JIP4	YDR475C	PAU2	P32612	120 aa		4.57	□□□□□ -1.68
JIP4	YDR475C	PTH1	P38876	190 aa	Known RBP	4.57	□□□□□ -1.68
JIP4	YDR475C	EMC5	P40540	141 aa		4.57	□□□□□ -1.68
JIP4	YDR475C	RSM19	P53733	91 aa	Predicted RBP	4.57	□□□□□ -1.68
JIP4	YDR475C	SLH1	P53327	1967 aa	Known RBP	4.57	□□□□□ -1.68
JIP4	YDR475C	PIR5	P46999	287 aa		4.57	□□□□□ -1.68
JIP4	YDR475C	ACC1	Q00955	2233 aa	Known RBP	4.56	□□□□□ -1.68
JIP4	YDR475C	PAU19	P0CE85	124 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	PAU21	P0CE86	164 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	PAU22	P0CE87	164 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
JIP4	YDR475C	FYV5	P25585	152 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	PAU3	P25610	124 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	MSL1	P40567	111 aa	Predicted RBP	4.56	□□□□□ -1.68
JIP4	YDR475C	IRC19	Q07843	230 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	YMR030W-A	Q3E760	96 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	RPL40A	P0CH08	128 aa	Known RBP	4.56	□□□□□ -1.68
JIP4	YDR475C	RPL40B	P0CH09	128 aa	Known RBP	4.56	□□□□□ -1.68
JIP4	YDR475C	YHR180W	P38868	163 aa		4.56	□□□□□ -1.68
JIP4	YDR475C	RPL13B	P40212	199 aa	Known RBP	4.56	□□□□□ -1.68
JIP4	YDR475C	UBC4	P15731	148 aa		4.55	□□□□□ -1.68
JIP4	YDR475C	PAU24	P38155	120 aa		4.55	□□□□□ -1.68
JIP4	YDR475C	MYO1	P08964	1928 aa		4.54	□□□□□ -1.68
JIP4	YDR475C	YFL012W	P43580	148 aa		4.54	□□□□□ -1.68
JIP4	YDR475C	YJL027C	P47063	138 aa	Predicted RBP	4.54	□□□□□ -1.68
JIP4	YDR475C	SOM1	Q05676	74 aa		4.54	□□□□□ -1.68
JIP4	YDR475C	RAF1	Q06891	181 aa		4.54	□□□□□ -1.68
JIP4	YDR475C	ATG40	Q99325	256 aa		4.54	□□□□□ -1.68
JIP4	YDR475C	FKS1	P38631	1876 aa	Known RBP	4.53	□□□□□ -1.68
JIP4	YDR475C	YEL045C	P32616	141 aa		4.53	□□□□□ -1.68
JIP4	YDR475C	YMR082C	Q04276	118 aa		4.53	□□□□□ -1.68
JIP4	YDR475C	IRC23	Q08416	157 aa		4.53	□□□□□ -1.68
JIP4	YDR475C	QCR10	P37299	77 aa		4.53	□□□□□ -1.68
JIP4	YDR475C	YGR164W	P53291	111 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms