RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SUS1Q6WNK7 96 aa2.35□□□□□ -2.03
TRM1YDR120C SWM2P40342 146 aa2.34□□□□□ -2.03
TRM1YDR120C ZEO1Q08245 113 aa2.34□□□□□ -2.03
TRM1YDR120C SCP1Q08873 200 aa2.34□□□□□ -2.03
TRM1YDR120C PET20Q99373 253 aa2.34□□□□□ -2.03
TRM1YDR120C MRS1P07266 363 aa2.34□□□□□ -2.04
TRM1YDR120C ATP15P21306 62 aa2.34□□□□□ -2.04
TRM1YDR120C CNB1P25296 175 aa2.34□□□□□ -2.04
TRM1YDR120C RRT1P38192 103 aa2.34□□□□□ -2.04
TRM1YDR120C TDA4P47153 279 aa2.34□□□□□ -2.04
TRM1YDR120C YNR077CP53758 84 aa2.34□□□□□ -2.04
TRM1YDR120C CWC27Q02770 301 aa2.34□□□□□ -2.04
TRM1YDR120C KEI1Q06346 221 aa2.34□□□□□ -2.04
TRM1YDR120C YCL001W-BQ96VH2 84 aa2.34□□□□□ -2.04
TRM1YDR120C YNL217WP40152 326 aa2.33□□□□□ -2.04
TRM1YDR120C POR2P40478 281 aa2.33□□□□□ -2.04
TRM1YDR120C ARP3P47117 449 aaKnown RBP2.33□□□□□ -2.04
TRM1YDR120C YPR013CQ12145 317 aa2.33□□□□□ -2.04
TRM1YDR120C YGL258W-AQ3E740 77 aa2.33□□□□□ -2.04
TRM1YDR120C PAN3P36102 679 aaPredicted RBP2.32□□□□□ -2.04
TRM1YDR120C SNF11P38956 169 aa2.32□□□□□ -2.04
TRM1YDR120C SNU13P39990 126 aaKnown RBP2.32□□□□□ -2.04
TRM1YDR120C FSF1Q12029 327 aaKnown RBP2.32□□□□□ -2.04
TRM1YDR120C UPS2P35200 230 aa2.31□□□□□ -2.04
TRM1YDR120C YBL071CP38185 102 aa2.31□□□□□ -2.04
TRM1YDR120C NSA2P40078 261 aaKnown RBP2.31□□□□□ -2.04
TRM1YDR120C YCL001W-AP87012 153 aa2.31□□□□□ -2.04
TRM1YDR120C DYN2Q02647 92 aa2.31□□□□□ -2.04
TRM1YDR120C THI74Q04083 370 aa2.31□□□□□ -2.04
TRM1YDR120C SYM1Q06563 197 aa2.31□□□□□ -2.04
TRM1YDR120C CKS1P20486 150 aaKnown RBP2.31□□□□□ -2.04
TRM1YDR120C IPI1P38803 334 aaPredicted RBP2.31□□□□□ -2.04
TRM1YDR120C HPA3P39979 161 aa2.31□□□□□ -2.04
TRM1YDR120C VTC1P40046 129 aaRIP-Chip data2.31□□□□□ -2.04not detected
TRM1YDR120C ERV14P53173 138 aa2.31□□□□□ -2.04
TRM1YDR120C EST3Q03096 181 aa2.31□□□□□ -2.04
TRM1YDR120C YOR011W-AQ3E807 68 aa2.31□□□□□ -2.04
TRM1YDR120C SRB6P32570 121 aa2.3□□□□□ -2.04
TRM1YDR120C FZF1P32805 299 aa2.3□□□□□ -2.04
TRM1YDR120C GLE2P40066 365 aa2.3□□□□□ -2.04
TRM1YDR120C GAT4P40569 121 aa2.3□□□□□ -2.04
TRM1YDR120C MOG1P47123 218 aa2.3□□□□□ -2.04
TRM1YDR120C SGF11Q03067 99 aa2.3□□□□□ -2.04
TRM1YDR120C ATP14Q12349 124 aa2.3□□□□□ -2.04
TRM1YDR120C QCR2P07257 368 aa2.29□□□□□ -2.04
TRM1YDR120C MRPL44P19956 98 aa2.29□□□□□ -2.04
TRM1YDR120C MRP17P28778 131 aa2.29□□□□□ -2.04
TRM1YDR120C GPI2P46961 280 aa2.29□□□□□ -2.04
TRM1YDR120C ARL3Q02804 198 aa2.29□□□□□ -2.04
TRM1YDR120C YOR385WQ08909 290 aa2.29□□□□□ -2.04
TRM1YDR120C FYV7Q12247 151 aa2.29□□□□□ -2.04
TRM1YDR120C MBF1O14467 151 aaKnown RBP2.28□□□□□ -2.04
TRM1YDR120C SER2P42941 309 aa2.28□□□□□ -2.04
TRM1YDR120C YGR017WP53210 297 aa2.28□□□□□ -2.04
TRM1YDR120C YIP3P53633 176 aa2.28□□□□□ -2.04
TRM1YDR120C VPS28Q02767 242 aa2.28□□□□□ -2.04
TRM1YDR120C SDH7Q04401 133 aa2.28□□□□□ -2.04
TRM1YDR120C COA6Q3E846 104 aa2.28□□□□□ -2.04
TRM1YDR120C YCR001WP25347 104 aa2.28□□□□□ -2.05
TRM1YDR120C POG1P40473 351 aa2.28□□□□□ -2.05
TRM1YDR120C YNL184CP53876 108 aa2.28□□□□□ -2.05
TRM1YDR120C UBC7Q02159 165 aa2.28□□□□□ -2.05
TRM1YDR120C VAM10Q08474 114 aa2.28□□□□□ -2.05
TRM1YDR120C RDI1Q12434 202 aa2.28□□□□□ -2.05
TRM1YDR120C IGO2Q9P305 131 aa2.28□□□□□ -2.05
TRM1YDR120C RUB1Q03919 77 aa2.27□□□□□ -2.05
TRM1YDR120C FRQ1Q06389 190 aa2.27□□□□□ -2.05
TRM1YDR120C YNL146C-AQ3E7Z1 64 aa2.27□□□□□ -2.05
TRM1YDR120C RPL2AP0CX45 254 aaKnown RBP2.26□□□□□ -2.05
TRM1YDR120C RPL2BP0CX46 254 aaKnown RBP2.26□□□□□ -2.05
TRM1YDR120C CSH1P38287 376 aa2.26□□□□□ -2.05
TRM1YDR120C SKI6P46948 246 aaPredicted RBP2.26□□□□□ -2.05
TRM1YDR120C YJR015WP47090 510 aa2.26□□□□□ -2.05
TRM1YDR120C YMR090WQ04304 227 aaKnown RBP2.26□□□□□ -2.05
TRM1YDR120C POC4Q12245 148 aaPredicted RBP2.26□□□□□ -2.05
TRM1YDR120C YDL085C-AQ3E7B7 68 aaKnown RBP2.26□□□□□ -2.05
TRM1YDR120C ATP5P09457 212 aa2.25□□□□□ -2.05
TRM1YDR120C YHR213WP0CI67 198 aa2.25□□□□□ -2.05
TRM1YDR120C RPS11AP0CX47 156 aaKnown RBP2.25□□□□□ -2.05
TRM1YDR120C RPS11BP0CX48 156 aaKnown RBP2.25□□□□□ -2.05
TRM1YDR120C FPR2P32472 135 aa2.25□□□□□ -2.05
TRM1YDR120C GSP1P32835 219 aaKnown RBP2.25□□□□□ -2.05
TRM1YDR120C GSP2P32836 220 aaKnown RBP2.25□□□□□ -2.05
TRM1YDR120C YER135CP40082 130 aa2.25□□□□□ -2.05
TRM1YDR120C TVP18Q04767 167 aa2.25□□□□□ -2.05
TRM1YDR120C YCR075W-AQ3E830 75 aa2.25□□□□□ -2.05
TRM1YDR120C SPS2P08459 502 aa2.25□□□□□ -2.05
TRM1YDR120C NHP6AP11632 93 aaKnown RBP2.25□□□□□ -2.05
TRM1YDR120C SEC59P20048 519 aa2.25□□□□□ -2.05
TRM1YDR120C SHG1P38337 142 aa2.25□□□□□ -2.05
TRM1YDR120C RPL13BP40212 199 aaKnown RBP2.25□□□□□ -2.05
TRM1YDR120C IMP2P46972 177 aa2.25□□□□□ -2.05
TRM1YDR120C SNN1P48232 102 aa2.25□□□□□ -2.05
TRM1YDR120C YGR025WP53216 100 aa2.25□□□□□ -2.05
TRM1YDR120C SAE3P89114 91 aa2.25□□□□□ -2.05
TRM1YDR120C RPL13AQ12690 199 aaPredicted RBP2.25□□□□□ -2.05
TRM1YDR120C PCC1Q3E833 88 aa2.25□□□□□ -2.05
TRM1YDR120C RPS25BP0C0T4 108 aaKnown RBP2.24□□□□□ -2.05
TRM1YDR120C SSS1P35179 80 aa2.24□□□□□ -2.05
TRM1YDR120C SFT2P38166 215 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 164.1 ms