RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C GPI14P47088 403 aaKnown RBP0.57□□□□□ -2.32
YAR009CYAR009C DOC1P53068 250 aa0.57□□□□□ -2.32
YAR009CYAR009C YKL023C-AQ2V2P3 75 aa0.57□□□□□ -2.32
YAR009CYAR009C YMR122W-AQ3E842 84 aa0.57□□□□□ -2.32
YAR009CYAR009C MRS1P07266 363 aa0.57□□□□□ -2.32
YAR009CYAR009C PAU24P38155 120 aa0.57□□□□□ -2.32
YAR009CYAR009C YER137CP40083 148 aaKnown RBP0.57□□□□□ -2.32
YAR009CYAR009C GNA1P43577 159 aaPredicted RBP0.57□□□□□ -2.32
YAR009CYAR009C YNR077CP53758 84 aa0.57□□□□□ -2.32
YAR009CYAR009C THI74Q04083 370 aa0.57□□□□□ -2.32
YAR009CYAR009C HTB2P02294 131 aa0.56□□□□□ -2.32
YAR009CYAR009C YHR138CP38841 114 aaPredicted RBP0.56□□□□□ -2.32
YAR009CYAR009C HNT1Q04344 158 aaKnown RBP0.56□□□□□ -2.32
YAR009CYAR009C MED11Q99278 115 aa0.56□□□□□ -2.32
YAR009CYAR009C QCR8P08525 94 aa0.56□□□□□ -2.32
YAR009CYAR009C YGR269WP40326 108 aa0.56□□□□□ -2.32
YAR009CYAR009C GVP36P40531 326 aaKnown RBP0.56□□□□□ -2.32
YAR009CYAR009C OTU1P43558 301 aa0.56□□□□□ -2.32
YAR009CYAR009C UPS3Q04006 179 aa0.56□□□□□ -2.32
YAR009CYAR009C SPC24Q04477 213 aa0.56□□□□□ -2.32
YAR009CYAR009C COA4Q05809 96 aa0.56□□□□□ -2.32
YAR009CYAR009C AME1P38313 324 aa0.56□□□□□ -2.32
YAR009CYAR009C HPM1P40481 377 aa0.56□□□□□ -2.32
YAR009CYAR009C ANT1Q06497 328 aa0.56□□□□□ -2.32
YAR009CYAR009C YOL118CQ08259 102 aa0.56□□□□□ -2.32
YAR009CYAR009C GCN3P14741 305 aa0.55□□□□□ -2.32
YAR009CYAR009C STE18P18852 110 aa0.55□□□□□ -2.32
YAR009CYAR009C YBR209WP38311 105 aa0.55□□□□□ -2.32
YAR009CYAR009C NVJ1P38881 321 aa0.55□□□□□ -2.32
YAR009CYAR009C YMR315WQ04869 349 aaKnown RBP0.55□□□□□ -2.32
YAR009CYAR009C FSF1Q12029 327 aaKnown RBP0.55□□□□□ -2.32
YAR009CYAR009C YKL183C-AQ3E765 70 aa0.55□□□□□ -2.32
YAR009CYAR009C URA5P13298 226 aaKnown RBP0.55□□□□□ -2.32
YAR009CYAR009C IDP1P21954 428 aaKnown RBP0.55□□□□□ -2.32
YAR009CYAR009C BET1P22804 142 aa0.55□□□□□ -2.32
YAR009CYAR009C SCP1Q08873 200 aa0.55□□□□□ -2.32
YAR009CYAR009C MSS2P40990 351 aa0.55□□□□□ -2.32
YAR009CYAR009C SPG1P50088 95 aa0.55□□□□□ -2.32
YAR009CYAR009C MGA1P53050 456 aa0.55□□□□□ -2.32
YAR009CYAR009C PDR17P53844 350 aa0.55□□□□□ -2.32
YAR009CYAR009C ATG41Q12048 136 aa0.55□□□□□ -2.32
YAR009CYAR009C RPL29P05747 59 aaPredicted RBP0.54□□□□□ -2.32
YAR009CYAR009C MRP17P28778 131 aa0.54□□□□□ -2.32
YAR009CYAR009C RRT1P38192 103 aa0.54□□□□□ -2.32
YAR009CYAR009C YKL068W-AQ3E826 78 aa0.54□□□□□ -2.32
YAR009CYAR009C YCR075W-AQ3E830 75 aa0.54□□□□□ -2.32
YAR009CYAR009C RPL25P04456 142 aaKnown RBP0.54□□□□□ -2.32
YAR009CYAR009C RPB3P16370 318 aaKnown RBP0.54□□□□□ -2.32
YAR009CYAR009C SPO13P23624 291 aa0.54□□□□□ -2.32
YAR009CYAR009C RPS20P38701 121 aaKnown RBP0.54□□□□□ -2.32
YAR009CYAR009C CIN5P40917 295 aa0.54□□□□□ -2.32
YAR009CYAR009C POP3P53833 195 aaPredicted RBP0.54□□□□□ -2.32
YAR009CYAR009C YNL190WP53872 204 aa0.54□□□□□ -2.32
YAR009CYAR009C ATP19P81451 68 aa0.54□□□□□ -2.32
YAR009CYAR009C SDH7Q04401 133 aa0.54□□□□□ -2.32
YAR009CYAR009C FCY1Q12178 158 aa0.54□□□□□ -2.32
YAR009CYAR009C ODC2Q99297 307 aa0.54□□□□□ -2.32
YAR009CYAR009C SEC4P07560 215 aaKnown RBP0.53□□□□□ -2.32
YAR009CYAR009C SEC59P20048 519 aa0.53□□□□□ -2.32
YAR009CYAR009C SHE2P36068 246 aaKnown RBP RIP-Chip data0.53□□□□□ -2.32not detected
YAR009CYAR009C KNH1P50112 268 aa0.53□□□□□ -2.32
YAR009CYAR009C FIT2Q08906 153 aa0.53□□□□□ -2.32
YAR009CYAR009C YOR192C-CQ3E736 78 aa0.53□□□□□ -2.32
YAR009CYAR009C YBR200W-AQ3E755 54 aa0.53□□□□□ -2.32
YAR009CYAR009C YFR032C-BQ8TGU2 87 aa0.53□□□□□ -2.32
YAR009CYAR009C EMC5P40540 141 aa0.53□□□□□ -2.32
YAR009CYAR009C TMA23Q03525 211 aa0.53□□□□□ -2.32
YAR009CYAR009C PET20Q99373 253 aa0.53□□□□□ -2.32
YAR009CYAR009C YLR236CA0A023PZG4 107 aa0.53□□□□□ -2.32
YAR009CYAR009C CKS1P20486 150 aaKnown RBP0.53□□□□□ -2.32
YAR009CYAR009C MAG1P22134 296 aaKnown RBP0.53□□□□□ -2.32
YAR009CYAR009C AHT1P29589 182 aa0.53□□□□□ -2.32
YAR009CYAR009C LSM7P53905 115 aaKnown RBP0.53□□□□□ -2.32
YAR009CYAR009C YOL160WQ08321 113 aa0.53□□□□□ -2.32
YAR009CYAR009C HUG1Q6Q5K6 68 aa0.53□□□□□ -2.32
YAR009CYAR009C YGL193CP53097 103 aa0.52□□□□□ -2.33
YAR009CYAR009C CUE4Q04201 117 aaPredicted RBP0.52□□□□□ -2.33
YAR009CYAR009C ATP15P21306 62 aa0.52□□□□□ -2.33
YAR009CYAR009C UBC7Q02159 165 aa0.52□□□□□ -2.33
YAR009CYAR009C MGR2Q02889 113 aa0.52□□□□□ -2.33
YAR009CYAR009C AIM34Q03673 198 aa0.52□□□□□ -2.33
YAR009CYAR009C YMR082CQ04276 118 aa0.52□□□□□ -2.33
YAR009CYAR009C YMR175W-AQ3E766 64 aa0.52□□□□□ -2.33
YAR009CYAR009C SNF4P12904 322 aa0.52□□□□□ -2.33
YAR009CYAR009C YER076CP40049 302 aa0.52□□□□□ -2.33
YAR009CYAR009C SEC11P15367 167 aa0.51□□□□□ -2.33
YAR009CYAR009C YHR007C-AQ07074 71 aa0.51□□□□□ -2.33
YAR009CYAR009C YGR121W-AQ3E816 71 aa0.51□□□□□ -2.33
YAR009CYAR009C RPL27AP0C2H6 136 aaKnown RBP0.51□□□□□ -2.33
YAR009CYAR009C SPT14P32363 452 aa0.51□□□□□ -2.33
YAR009CYAR009C NSA2P40078 261 aaKnown RBP0.51□□□□□ -2.33
YAR009CYAR009C AIM19P40502 157 aa0.51□□□□□ -2.33
YAR009CYAR009C AIM25P47140 327 aa0.51□□□□□ -2.33
YAR009CYAR009C YMR320WQ04897 101 aa0.51□□□□□ -2.33
YAR009CYAR009C NAT3Q06504 195 aa0.51□□□□□ -2.33
YAR009CYAR009C COA2Q3E823 68 aa0.51□□□□□ -2.33
YAR009CYAR009C SPC25P40014 221 aa0.51□□□□□ -2.33
YAR009CYAR009C SFT2P38166 215 aa0.5□□□□□ -2.33
YAR009CYAR009C YDR042CQ03205 200 aa0.5□□□□□ -2.33
YAR009CYAR009C YAL065CO13511 128 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 109 ms