RNA–Protein interactions for RNA: RUF23

RUF23, Transcript of RNA of Unknown Function, yeast

Gene RUF23, Length 254 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF23	RUF23	SDS23	P53172	527 aa		4.9	□□□□□ -1.63
RUF23	RUF23	CUE4	Q04201	117 aa	Predicted RBP	4.9	□□□□□ -1.63
RUF23	RUF23	WIP1	Q2V2P8	89 aa		4.9	□□□□□ -1.63
RUF23	RUF23	YCR075W-A	Q3E830	75 aa		4.9	□□□□□ -1.63
RUF23	RUF23	HTL1	Q9URQ5	78 aa		4.9	□□□□□ -1.63
RUF23	RUF23	RPL23A	P0CX41	137 aa	Known RBP	4.89	□□□□□ -1.63
RUF23	RUF23	RPL23B	P0CX42	137 aa	Known RBP	4.89	□□□□□ -1.63
RUF23	RUF23	AGA1	P32323	725 aa		4.89	□□□□□ -1.63
RUF23	RUF23	MIG3	P39943	394 aa		4.89	□□□□□ -1.63
RUF23	RUF23	BRP1	P53194	125 aa		4.89	□□□□□ -1.63
RUF23	RUF23	GRH1	Q04410	372 aa	Known RBP	4.89	□□□□□ -1.63
RUF23	RUF23	TVP18	Q04767	167 aa		4.89	□□□□□ -1.63
RUF23	RUF23	DXO1	Q06349	442 aa		4.89	□□□□□ -1.63
RUF23	RUF23	CGR1	P53188	120 aa		4.88	□□□□□ -1.63
RUF23	RUF23	YLR281C	Q05863	155 aa		4.88	□□□□□ -1.63
RUF23	RUF23	FSF1	Q12029	327 aa	Known RBP	4.88	□□□□□ -1.63
RUF23	RUF23	RPL42A	P0CX27	106 aa	Known RBP	4.87	□□□□□ -1.63
RUF23	RUF23	RPL42B	P0CX28	106 aa	Known RBP	4.87	□□□□□ -1.63
RUF23	RUF23	YGR025W	P53216	100 aa		4.87	□□□□□ -1.63
RUF23	RUF23	AIM34	Q03673	198 aa		4.87	□□□□□ -1.63
RUF23	RUF23	YBR200W-A	Q3E755	54 aa		4.87	□□□□□ -1.63
RUF23	RUF23	YCR024C-B	Q3E7Z8	88 aa		4.87	□□□□□ -1.63
RUF23	RUF23	Q0255	P03881	472 aa		4.86	□□□□□ -1.63
RUF23	RUF23	SEC4	P07560	215 aa	Known RBP	4.86	□□□□□ -1.63
RUF23	RUF23	TEM1	P38987	245 aa		4.86	□□□□□ -1.63
RUF23	RUF23	LSM8	P47093	109 aa	Known RBP	4.86	□□□□□ -1.63
RUF23	RUF23	YGR017W	P53210	297 aa		4.86	□□□□□ -1.63
RUF23	RUF23	COX12	Q01519	83 aa		4.86	□□□□□ -1.63
RUF23	RUF23	CNL1	Q06333	122 aa		4.86	□□□□□ -1.63
RUF23	RUF23	RPL16B	P26785	198 aa	Known RBP	4.84	□□□□□ -1.63
RUF23	RUF23	MRPL11	P36521	249 aa	Predicted RBP	4.84	□□□□□ -1.63
RUF23	RUF23	OST3	P48439	350 aa		4.84	□□□□□ -1.63
RUF23	RUF23	ERV14	P53173	138 aa		4.84	□□□□□ -1.63
RUF23	RUF23	YLR122C	Q12312	125 aa		4.84	□□□□□ -1.63
RUF23	RUF23	YPR053C	Q6Q5F3	151 aa		4.84	□□□□□ -1.63
RUF23	RUF23	KTI12	P34253	313 aa	Known RBP	4.83	□□□□□ -1.64
RUF23	RUF23	VHS2	P40463	436 aa		4.83	□□□□□ -1.64
RUF23	RUF23	MGR2	Q02889	113 aa		4.83	□□□□□ -1.64
RUF23	RUF23	MSC3	Q05812	728 aa		4.83	□□□□□ -1.64
RUF23	RUF23	YOL085C	Q99345	113 aa		4.83	□□□□□ -1.64
RUF23	RUF23	PFY1	P07274	126 aa		4.82	□□□□□ -1.64
RUF23	RUF23	GSP1	P32835	219 aa	Known RBP	4.82	□□□□□ -1.64
RUF23	RUF23	GSP2	P32836	220 aa	Known RBP	4.82	□□□□□ -1.64
RUF23	RUF23	VPS71	Q03433	280 aa		4.82	□□□□□ -1.64
RUF23	RUF23	VAM10	Q08474	114 aa		4.82	□□□□□ -1.64
RUF23	RUF23	YLR050C	Q12155	161 aa	Known RBP	4.82	□□□□□ -1.64
RUF23	RUF23	YGR240C-A	Q3E786	66 aa		4.82	□□□□□ -1.64
RUF23	RUF23	YCR023C	P25351	611 aa		4.81	□□□□□ -1.64
RUF23	RUF23	PAU16	P35994	123 aa		4.81	□□□□□ -1.64
RUF23	RUF23	YKR070W	P36151	352 aa	Known RBP	4.81	□□□□□ -1.64
RUF23	RUF23	SDH8	P38345	138 aa		4.81	□□□□□ -1.64
RUF23	RUF23	RRT13	P40042	185 aa		4.81	□□□□□ -1.64
RUF23	RUF23	TOS6	P48560	102 aa		4.81	□□□□□ -1.64
RUF23	RUF23	YPS5	P53057	165 aa		4.81	□□□□□ -1.64
RUF23	RUF23	SGF11	Q03067	99 aa		4.81	□□□□□ -1.64
RUF23	RUF23	ERG27	Q12452	347 aa	Known RBP	4.81	□□□□□ -1.64
RUF23	RUF23	YIL134C-A	Q45U18	67 aa		4.81	□□□□□ -1.64
RUF23	RUF23	SAL1	D6W196	494 aa		4.8	□□□□□ -1.64
RUF23	RUF23	RPS8A	P0CX39	200 aa	Known RBP	4.8	□□□□□ -1.64
RUF23	RUF23	RPS8B	P0CX40	200 aa	Known RBP	4.8	□□□□□ -1.64
RUF23	RUF23	YKR032W	P36127	104 aa		4.8	□□□□□ -1.64
RUF23	RUF23	YER076C	P40049	302 aa		4.8	□□□□□ -1.64
RUF23	RUF23	YER134C	P40081	178 aa		4.8	□□□□□ -1.64
RUF23	RUF23	ATP23	P53722	227 aa		4.8	□□□□□ -1.64
RUF23	RUF23	YLR042C	Q07990	161 aa		4.8	□□□□□ -1.64
RUF23	RUF23	FYV7	Q12247	151 aa		4.8	□□□□□ -1.64
RUF23	RUF23	RPL27B	P0C2H7	136 aa	Known RBP	4.79	□□□□□ -1.64
RUF23	RUF23	YNL200C	P40165	246 aa	Known RBP	4.79	□□□□□ -1.64
RUF23	RUF23	DCV1	P43595	202 aa		4.79	□□□□□ -1.64
RUF23	RUF23	ERI1	P62651	68 aa	Known RBP	4.79	□□□□□ -1.64
RUF23	RUF23	PMP3	P87284	55 aa		4.79	□□□□□ -1.64
RUF23	RUF23	FCF1	Q05498	189 aa	Predicted RBP	4.79	□□□□□ -1.64
RUF23	RUF23	UTP20	P35194	2493 aa	Known RBP	4.78	□□□□□ -1.64
RUF23	RUF23	URM1	P40554	99 aa	Predicted RBP	4.78	□□□□□ -1.64
RUF23	RUF23	CDC40	P40968	455 aa	Predicted RBP	4.78	□□□□□ -1.64
RUF23	RUF23	GLO1	P50107	326 aa		4.78	□□□□□ -1.64
RUF23	RUF23	DUO1	P53168	247 aa	Known RBP	4.78	□□□□□ -1.64
RUF23	RUF23	YIL014C-A	Q02598	104 aa		4.78	□□□□□ -1.64
RUF23	RUF23	YDR042C	Q03205	200 aa		4.78	□□□□□ -1.64
RUF23	RUF23	YOR008C-A	Q3E7B9	74 aa		4.78	□□□□□ -1.64
RUF23	RUF23	YPR014C	Q6B0W2	109 aa		4.78	□□□□□ -1.64
RUF23	RUF23	PCL2	P25693	308 aa		4.77	□□□□□ -1.65
RUF23	RUF23	APS1	P35181	156 aa		4.77	□□□□□ -1.65
RUF23	RUF23	PET8	P38921	284 aa		4.77	□□□□□ -1.65
RUF23	RUF23	YNL217W	P40152	326 aa		4.77	□□□□□ -1.65
RUF23	RUF23	YFR035C	P43608	114 aa		4.77	□□□□□ -1.65
RUF23	RUF23	POP3	P53833	195 aa	Predicted RBP	4.77	□□□□□ -1.65
RUF23	RUF23	PKR1	Q03880	122 aa	Known RBP	4.77	□□□□□ -1.65
RUF23	RUF23	DPP1	Q05521	289 aa		4.77	□□□□□ -1.65
RUF23	RUF23	DGA1	Q08650	418 aa		4.77	□□□□□ -1.65
RUF23	RUF23	AQY1	P0CD91	305 aa		4.76	□□□□□ -1.65
RUF23	RUF23	FUN14	P18411	198 aa		4.76	□□□□□ -1.65
RUF23	RUF23	YCR007C	P25354	239 aa		4.76	□□□□□ -1.65
RUF23	RUF23	MRP49	P32388	137 aa		4.76	□□□□□ -1.65
RUF23	RUF23	YCR001W	P25347	104 aa		4.75	□□□□□ -1.65
RUF23	RUF23	SEN15	Q04675	128 aa		4.75	□□□□□ -1.65
RUF23	RUF23	YPR010C-A	A5Z2X5	72 aa		4.74	□□□□□ -1.65
RUF23	RUF23	TRP1	P00912	224 aa		4.74	□□□□□ -1.65
RUF23	RUF23	UBC5	P15732	148 aa		4.74	□□□□□ -1.65
RUF23	RUF23	FYV4	P38783	130 aa	Predicted RBP	4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms